Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 AC083880.1-201ENST00000608266 535 ntBASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 AL121906.2-201ENST00000621597 723 ntBASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV3A0A0B4J244 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 YBX1P10-201ENST00000444752 975 ntBASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 AC120498.8-201ENST00000614275 531 ntBASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 AC104581.1-202ENST00000635932 2618 ntBASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV3A0A0B4J244 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 AC060766.5-201ENST00000590539 871 ntBASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV3A0A0B4J244 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV3A0A0B4J244 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV3A0A0B4J244 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
TRAV3A0A0B4J244 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV3A0A0B4J244 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms