Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RPL35AP22-201ENST00000436855 335 ntBASIC7.17□□□□□ -1.26
VARS2Q5ST30 COL11A2P1-205ENST00000441798 676 ntBASIC7.17□□□□□ -1.26
VARS2Q5ST30 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VARS2Q5ST30 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC7.17□□□□□ -1.26
VARS2Q5ST30 AP000893.1-201ENST00000474462 794 ntBASIC7.17□□□□□ -1.26
VARS2Q5ST30 RNU6-685P-201ENST00000517088 95 ntBASIC7.17□□□□□ -1.26
VARS2Q5ST30 IGKV2D-10-201ENST00000520194 281 ntBASIC7.17□□□□□ -1.26
VARS2Q5ST30 FAM60BP-201ENST00000578364 658 ntBASIC7.17□□□□□ -1.26
VARS2Q5ST30 RN7SL230P-201ENST00000580835 303 ntBASIC7.17□□□□□ -1.26
VARS2Q5ST30 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.17□□□□□ -1.26
VARS2Q5ST30 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC7.17□□□□□ -1.26
VARS2Q5ST30 AL162424.1-201ENST00000602325 221 ntBASIC7.17□□□□□ -1.26
VARS2Q5ST30 AL359547.2-201ENST00000615810 418 ntBASIC7.17□□□□□ -1.26
VARS2Q5ST30 AC089999.3-201ENST00000622440 577 ntBASIC7.17□□□□□ -1.26
VARS2Q5ST30 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VARS2Q5ST30 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.17□□□□□ -1.26
VARS2Q5ST30 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.17□□□□□ -1.26
VARS2Q5ST30 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.17□□□□□ -1.26
VARS2Q5ST30 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.17□□□□□ -1.26
VARS2Q5ST30 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VARS2Q5ST30 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
VARS2Q5ST30 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VARS2Q5ST30 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
VARS2Q5ST30 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC7.17□□□□□ -1.26
VARS2Q5ST30 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VARS2Q5ST30 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VARS2Q5ST30 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
VARS2Q5ST30 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VARS2Q5ST30 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.17□□□□□ -1.26
VARS2Q5ST30 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VARS2Q5ST30 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VARS2Q5ST30 AC110774.1-201ENST00000623567 2018 ntBASIC7.17□□□□□ -1.26
VARS2Q5ST30 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.17□□□□□ -1.26
VARS2Q5ST30 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VARS2Q5ST30 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VARS2Q5ST30 AC089998.1-201ENST00000548575 3141 ntBASIC7.16□□□□□ -1.26
VARS2Q5ST30 RACGAP1P-201ENST00000550663 1879 ntBASIC7.16□□□□□ -1.26
VARS2Q5ST30 PPIAP24-201ENST00000328558 471 ntBASIC7.16□□□□□ -1.26
VARS2Q5ST30 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VARS2Q5ST30 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VARS2Q5ST30 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 RNU6-393P-201ENST00000384475 107 ntBASIC7.16□□□□□ -1.26
VARS2Q5ST30 AC008171.1-201ENST00000395058 200 ntBASIC7.16□□□□□ -1.26
VARS2Q5ST30 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 MTND3P9-201ENST00000429526 346 ntBASIC7.16□□□□□ -1.26
VARS2Q5ST30 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VARS2Q5ST30 UBBP5-201ENST00000446970 266 ntBASIC7.16□□□□□ -1.26
VARS2Q5ST30 NUTF2P7-201ENST00000453086 375 ntBASIC7.16□□□□□ -1.26
VARS2Q5ST30 AL161747.1-201ENST00000480068 358 ntBASIC7.16□□□□□ -1.26
VARS2Q5ST30 RN7SL382P-201ENST00000482631 282 ntBASIC7.16□□□□□ -1.26
VARS2Q5ST30 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VARS2Q5ST30 RNU2-69P-201ENST00000516061 100 ntBASIC7.16□□□□□ -1.26
VARS2Q5ST30 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 AMZ2P1-203ENST00000565833 850 ntBASIC7.16□□□□□ -1.26
VARS2Q5ST30 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 AC012368.3-201ENST00000604190 219 ntBASIC7.16□□□□□ -1.26
VARS2Q5ST30 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.16□□□□□ -1.26
VARS2Q5ST30 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 GABPAP-201ENST00000419271 1356 ntBASIC7.16□□□□□ -1.26
VARS2Q5ST30 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VARS2Q5ST30 AC034111.1-201ENST00000562143 3770 ntBASIC7.16□□□□□ -1.26
VARS2Q5ST30 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
VARS2Q5ST30 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VARS2Q5ST30 AC007998.4-201ENST00000612496 2533 ntBASIC7.16□□□□□ -1.26
VARS2Q5ST30 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
VARS2Q5ST30 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
VARS2Q5ST30 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
VARS2Q5ST30 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
VARS2Q5ST30 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
VARS2Q5ST30 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
VARS2Q5ST30 AC007996.1-201ENST00000620414 2821 ntBASIC7.15□□□□□ -1.26
VARS2Q5ST30 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
VARS2Q5ST30 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
VARS2Q5ST30 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
VARS2Q5ST30 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.15□□□□□ -1.26
VARS2Q5ST30 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
VARS2Q5ST30 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.26
VARS2Q5ST30 HSP90AA4P-202ENST00000506915 2228 ntBASIC7.15□□□□□ -1.26
VARS2Q5ST30 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
VARS2Q5ST30 AC009237.3-203ENST00000442128 3551 ntBASIC7.15□□□□□ -1.26
VARS2Q5ST30 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.15□□□□□ -1.26
VARS2Q5ST30 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
VARS2Q5ST30 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms