RNA–Protein interactions for RNA: ENST00000384475.1

RNU6-393P-201, Transcript of RNA, U6 small nuclear 393, pseudogene, humanhuman

BASIC

Gene RNU6-393P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-393P-201ENST00000384475 AEBP2Q6ZN18 517 aaPredicted RBP16.11■□□□□ 0.17
RNU6-393P-201ENST00000384475 CHIC1Q5VXU3 224 aa15.77■□□□□ 0.12
RNU6-393P-201ENST00000384475 PHF23Q9BUL5 403 aaPredicted RBP13.89□□□□□ -0.19
RNU6-393P-201ENST00000384475 SENP3Q9H4L4 574 aaPredicted RBP13.64□□□□□ -0.23
RNU6-393P-201ENST00000384475 PLPPR3Q6T4P5 718 aa12.82□□□□□ -0.36
RNU6-393P-201ENST00000384475 FOXD1Q16676 465 aa12.67□□□□□ -0.38
RNU6-393P-201ENST00000384475 PPP6R1Q9UPN7 881 aa12.25□□□□□ -0.45
RNU6-393P-201ENST00000384475 ADRA2BP18089 450 aa12.22□□□□□ -0.45
RNU6-393P-201ENST00000384475 PIAS4Q8N2W9 510 aaPredicted RBP11.93□□□□□ -0.5
RNU6-393P-201ENST00000384475 MSH5O43196 834 aa11.65□□□□□ -0.54
RNU6-393P-201ENST00000384475 PPP4R3CPQ6ZMV5 832 aa11.31□□□□□ -0.6
RNU6-393P-201ENST00000384475 SCAF1Q9H7N4 1312 aaKnown RBP11.17□□□□□ -0.62
RNU6-393P-201ENST00000384475 KCNA4P22459 653 aa11.1□□□□□ -0.63
RNU6-393P-201ENST00000384475 MAPK8IP2Q13387 824 aaPredicted RBP11.08□□□□□ -0.64
RNU6-393P-201ENST00000384475 NCBP3Q53F19 620 aaKnown RBP11.01□□□□□ -0.65
RNU6-393P-201ENST00000384475 CNKSR2Q8WXI2 1034 aa10.98□□□□□ -0.65
RNU6-393P-201ENST00000384475 DMRT2Q9Y5R5 561 aa10.91□□□□□ -0.66
RNU6-393P-201ENST00000384475 NPM3O75607 178 aaKnown RBP10.86□□□□□ -0.67
RNU6-393P-201ENST00000384475 RNF216Q9NWF9 866 aaPredicted RBP10.75□□□□□ -0.69
RNU6-393P-201ENST00000384475 HOXD11P31277 338 aaPredicted RBP10.71□□□□□ -0.69
RNU6-393P-201ENST00000384475 DNAJC5BQ9UF47 199 aa10.57□□□□□ -0.72
RNU6-393P-201ENST00000384475 SLC4A1APQ9BWU0 796 aaKnown RBP10.56□□□□□ -0.72
RNU6-393P-201ENST00000384475 POTEDQ86YR6 584 aa10.54□□□□□ -0.72
RNU6-393P-201ENST00000384475 DCAF8L1A6NGE4 600 aa10.4□□□□□ -0.74
RNU6-393P-201ENST00000384475 EHMT2Q96KQ7 1210 aa10.3□□□□□ -0.76
RNU6-393P-201ENST00000384475 SLC4A2P04920 1241 aa10.26□□□□□ -0.77
RNU6-393P-201ENST00000384475 ZBTB22O15209 634 aa10.21□□□□□ -0.77
RNU6-393P-201ENST00000384475 CSRNP3Q8WYN3 585 aa10.21□□□□□ -0.77
RNU6-393P-201ENST00000384475 FOXD4L1Q9NU39 408 aa10.19□□□□□ -0.78
RNU6-393P-201ENST00000384475 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.18□□□□□ -0.78
RNU6-393P-201ENST00000384475 U3KPZ7 1027 aaPredicted RBP10.03□□□□□ -0.8
RNU6-393P-201ENST00000384475 MYCNP04198 464 aaPredicted RBP10.02□□□□□ -0.81
RNU6-393P-201ENST00000384475 RNF39Q9H2S5 420 aa10□□□□□ -0.81
RNU6-393P-201ENST00000384475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.91□□□□□ -0.82
RNU6-393P-201ENST00000384475 HNRNPUL2Q1KMD3 747 aaKnown RBP9.91□□□□□ -0.82
RNU6-393P-201ENST00000384475 C1QBPQ07021 282 aaKnown RBP9.88□□□□□ -0.83
RNU6-393P-201ENST00000384475 SAMD1Q6SPF0 538 aaPredicted RBP9.88□□□□□ -0.83
RNU6-393P-201ENST00000384475 ATXN8OSP0DMR3 200 aa9.84□□□□□ -0.83
RNU6-393P-201ENST00000384475 APLP2Q06481 763 aa9.78□□□□□ -0.84
RNU6-393P-201ENST00000384475 ATF5Q9Y2D1 282 aaPredicted RBP9.77□□□□□ -0.85
RNU6-393P-201ENST00000384475 SPINK5Q9NQ38 1064 aaPredicted RBP9.74□□□□□ -0.85
RNU6-393P-201ENST00000384475 CACNB1Q02641 598 aaPredicted RBP9.69□□□□□ -0.86
RNU6-393P-201ENST00000384475 CAPN15O75808 1086 aa9.68□□□□□ -0.86
RNU6-393P-201ENST00000384475 TRHP20396 242 aaPredicted RBP9.65□□□□□ -0.86
RNU6-393P-201ENST00000384475 ZNF219Q9P2Y4 722 aaPredicted RBP9.65□□□□□ -0.86
RNU6-393P-201ENST00000384475 DSG3P32926 999 aa9.53□□□□□ -0.88
RNU6-393P-201ENST00000384475 POLA2Q14181 598 aa9.52□□□□□ -0.89
RNU6-393P-201ENST00000384475 ABCB7O75027 752 aa9.5□□□□□ -0.89
RNU6-393P-201ENST00000384475 MKRN4PQ13434 485 aaPredicted RBP9.35□□□□□ -0.91
RNU6-393P-201ENST00000384475 ZBTB12Q9Y330 459 aaPredicted RBP9.35□□□□□ -0.91
RNU6-393P-201ENST00000384475 FBLN2P98095 1184 aa9.34□□□□□ -0.91
RNU6-393P-201ENST00000384475 FKBP8Q14318 412 aa9.2□□□□□ -0.94
RNU6-393P-201ENST00000384475 OSCARQ8IYS5 282 aa9.17□□□□□ -0.94
RNU6-393P-201ENST00000384475 SPDYE4A6NLX3 237 aa9.15□□□□□ -0.94
RNU6-393P-201ENST00000384475 SPDYE2BA6NHP3 402 aa9.12□□□□□ -0.95
RNU6-393P-201ENST00000384475 SPDYE6P0CI01 402 aa9.12□□□□□ -0.95
RNU6-393P-201ENST00000384475 SPDYE2Q495Y8 402 aa9.12□□□□□ -0.95
RNU6-393P-201ENST00000384475 ZNF692Q9BU19 519 aaPredicted RBP9.08□□□□□ -0.96
RNU6-393P-201ENST00000384475 RBM42Q9BTD8 480 aaKnown RBP9.06□□□□□ -0.96
RNU6-393P-201ENST00000384475 SSUH2Q9Y2M2 353 aa9.05□□□□□ -0.96
RNU6-393P-201ENST00000384475 PROM2Q8N271 834 aa9.02□□□□□ -0.97
RNU6-393P-201ENST00000384475 AKT1S1Q96B36 256 aa8.98□□□□□ -0.97
RNU6-393P-201ENST00000384475 PABPN1Q86U42 306 aaKnown RBP eCLIP8.97□□□□□ -0.97
RNU6-393P-201ENST00000384475 REM2Q8IYK8 340 aaPredicted RBP8.89□□□□□ -0.99
RNU6-393P-201ENST00000384475 FBXO3Q9UK99 471 aa8.86□□□□□ -0.99
RNU6-393P-201ENST00000384475 SPDYE1Q8NFV5 336 aaPredicted RBP8.83□□□□□ -1
RNU6-393P-201ENST00000384475 STAG3Q9UJ98 1225 aa8.83□□□□□ -1
RNU6-393P-201ENST00000384475 PITPNM1O00562 1244 aa8.78□□□□□ -1
RNU6-393P-201ENST00000384475 CLEC11AQ9Y240 323 aa8.77□□□□□ -1.01
RNU6-393P-201ENST00000384475 VASPP50552 380 aaPredicted RBP8.73□□□□□ -1.01
RNU6-393P-201ENST00000384475 PRR29P0C7W0 189 aa8.72□□□□□ -1.01
RNU6-393P-201ENST00000384475 MIER1Q8N108 512 aa8.68□□□□□ -1.02
RNU6-393P-201ENST00000384475 CHRDL2Q6WN34 429 aa8.67□□□□□ -1.02
RNU6-393P-201ENST00000384475 PLCD3Q8N3E9 789 aa8.65□□□□□ -1.02
RNU6-393P-201ENST00000384475 IFNLR1Q8IU57 520 aaPredicted RBP8.64□□□□□ -1.03
RNU6-393P-201ENST00000384475 FXR2P51116 673 aaKnown RBP eCLIP8.63□□□□□ -1.03
RNU6-393P-201ENST00000384475 CREBZFQ9NS37 354 aa8.63□□□□□ -1.03
RNU6-393P-201ENST00000384475 PLEKHG5O94827 1062 aa8.6□□□□□ -1.03
RNU6-393P-201ENST00000384475 PIP4P2Q8N4L2 257 aa8.58□□□□□ -1.04
RNU6-393P-201ENST00000384475 CHADLQ6NUI6 762 aa8.57□□□□□ -1.04
RNU6-393P-201ENST00000384475 KLHL34Q8N239 644 aa8.57□□□□□ -1.04
RNU6-393P-201ENST00000384475 PRKAR2AP13861 404 aaKnown RBP8.56□□□□□ -1.04
RNU6-393P-201ENST00000384475 MNX1P50219 401 aaPredicted RBP8.56□□□□□ -1.04
RNU6-393P-201ENST00000384475 ZBTB47Q9UFB7 747 aaPredicted RBP8.55□□□□□ -1.04
RNU6-393P-201ENST00000384475 SPOCK2Q92563 424 aa8.52□□□□□ -1.05
RNU6-393P-201ENST00000384475 FARP1Q9Y4F1 1045 aaPredicted RBP8.5□□□□□ -1.05
RNU6-393P-201ENST00000384475 NPM1P06748 294 aaKnown RBP eCLIP8.47□□□□□ -1.05
RNU6-393P-201ENST00000384475 NUBP1P53384 320 aa8.46□□□□□ -1.06
RNU6-393P-201ENST00000384475 AMER1Q5JTC6 1135 aaPredicted RBP8.45□□□□□ -1.06
RNU6-393P-201ENST00000384475 RTN4Q9NQC3 1192 aaKnown RBP8.44□□□□□ -1.06
RNU6-393P-201ENST00000384475 RASEFQ8IZ41 740 aa8.4□□□□□ -1.06
RNU6-393P-201ENST00000384475 PKD2Q13563 968 aa8.37□□□□□ -1.07
RNU6-393P-201ENST00000384475 DCAF8Q5TAQ9 597 aa8.37□□□□□ -1.07
RNU6-393P-201ENST00000384475 GSE1Q14687 1217 aa8.36□□□□□ -1.07
RNU6-393P-201ENST00000384475 FAM212AQ96EL1 285 aa8.36□□□□□ -1.07
RNU6-393P-201ENST00000384475 CIZ1Q9ULV3 898 aaPredicted RBP8.36□□□□□ -1.07
RNU6-393P-201ENST00000384475 POTEHQ6S545 545 aa8.35□□□□□ -1.07
RNU6-393P-201ENST00000384475 TSPYL2Q9H2G4 693 aaPredicted RBP8.33□□□□□ -1.08
RNU6-393P-201ENST00000384475 C19orf67A6NJJ6 358 aa8.32□□□□□ -1.08
RNU6-393P-201ENST00000384475 CD44P16070 742 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms