Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 NLN-201ENST00000380985 8661 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 LINC00703-202ENST00000454152 2390 ntTSL 2 BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 EFTUD2-223ENST00000592576 3364 ntTSL 2 BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 CACNA1S-202ENST00000367338 5996 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 CELF2-205ENST00000542579 7982 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 PREPL-204ENST00000409272 3030 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 AC100827.4-201ENST00000563464 2441 ntBASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 BTK-202ENST00000372880 2248 ntTSL 2 BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 ZNF80-203ENST00000619534 2216 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 DHX35-203ENST00000373325 3287 ntTSL 5 BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 CLCN4-202ENST00000380833 6750 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 KLHL14-202ENST00000359358 4312 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 CDH23-203ENST00000398788 4329 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 DDIAS-211ENST00000533655 3533 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 GTF2IP4-201ENST00000453092 2054 ntBASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 NLRC5-203ENST00000436936 6724 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 RTL10-203ENST00000407472 6523 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 SERPINB8-202ENST00000353706 3387 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
KRTAP3-3Q9BYR6 KCTD19-201ENST00000304372 2958 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 SPRR1B-201ENST00000307098 620 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 SNORD115-14-201ENST00000363090 81 ntBASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 Y_RNA.351-201ENST00000365436 96 ntBASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 YME1L1P1-201ENST00000429435 297 ntBASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 MRPS16P2-201ENST00000445106 408 ntBASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 HMGN1P7-201ENST00000491722 313 ntBASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 RN7SL635P-201ENST00000492123 296 ntBASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 RNA5SP459-201ENST00000516628 100 ntBASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 AC136777.2-201ENST00000522979 358 ntBASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 AL354919.2-201ENST00000527035 537 ntTSL 4 BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 AC025575.2-201ENST00000549357 565 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 AC087685.1-201ENST00000587507 141 ntBASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 TDGF1P7-201ENST00000593394 559 ntBASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 MIR7150-201ENST00000614393 94 ntBASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 PROX1-AS1-221ENST00000615085 673 ntTSL 5 BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 AC244472.5-201ENST00000619103 344 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 AC026336.5-201ENST00000624455 738 ntBASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 MIR664A-201ENST00000626086 82 ntBASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 AL592158.1-201ENST00000632210 4477 ntBASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 CACNA1C-201ENST00000327702 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 CSNK2A1-202ENST00000349736 4299 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 ZSCAN32-201ENST00000304926 3027 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 PRDM9-201ENST00000296682 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 CSF3R-203ENST00000373103 3454 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 ADNP-204ENST00000396032 4581 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 EGFLAM-201ENST00000322350 4411 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 AC113554.2-201ENST00000577647 4862 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 TCAF1-201ENST00000355951 3343 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 AL035696.1-201ENST00000381078 2007 ntTSL 2 BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 AR-201ENST00000374690 10652 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 AL590065.1-201ENST00000603371 4774 ntBASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 FRMPD1-203ENST00000539465 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 ATP6V0A1-202ENST00000343619 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 OSBPL6-204ENST00000359685 7114 ntTSL 5 BASIC4.65□□□□□ -1.67
KRTAP3-3Q9BYR6 RTL1-201ENST00000534062 4193 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 TNPO3-202ENST00000471166 3019 ntTSL 5 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 TMPPE-201ENST00000342462 3962 ntAPPRIS P3 TSL 2 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 AC239859.1-201ENST00000449715 2594 ntBASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 TMEM242-202ENST00000400788 4043 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 SEMA6D-203ENST00000355997 5908 ntTSL 5 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 LIMCH1-203ENST00000396595 5740 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 METAP2-202ENST00000323666 3601 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 U91328.2-201ENST00000606723 4130 ntTSL 2 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 CCDC136-201ENST00000297788 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 LILRA2-201ENST00000251376 4429 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 CACNA1D-202ENST00000350061 7636 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 KCNH5-204ENST00000420622 2711 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 MAOA-201ENST00000338702 4015 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 TMEM87A-203ENST00000448392 3049 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 PDE4DIP-219ENST00000524974 8305 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 ARNTL2-202ENST00000266503 2291 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 RNU5F-1-201ENST00000362507 117 ntBASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 SNORD14D-201ENST00000384390 87 ntBASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 SNORA70E-201ENST00000384492 135 ntBASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 RNU6-663P-201ENST00000391105 106 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms