RNA–Protein interactions for RNA: ENST00000350061.9

CACNA1D-202, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1D, Length 7,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-202ENST00000350061 NISCHQ9Y2I1 1504 aa16.9■□□□□ 0.3
CACNA1D-202ENST00000350061 HRCP23327 699 aa15.35■□□□□ 0.05
CACNA1D-202ENST00000350061 CHIC1Q5VXU3 224 aa14.99□□□□□ -0.01
CACNA1D-202ENST00000350061 PELP1Q8IZL8 1130 aaKnown RBP14.98□□□□□ -0.01
CACNA1D-202ENST00000350061 SUPT5HO00267 1087 aaKnown RBP14.81□□□□□ -0.04
CACNA1D-202ENST00000350061 PCGF6Q9BYE7 350 aa14.73□□□□□ -0.05
CACNA1D-202ENST00000350061 DCAF1Q9Y4B6 1507 aa14.61□□□□□ -0.07
CACNA1D-202ENST00000350061 DCAF8L2P0C7V8 631 aa14.58□□□□□ -0.08
CACNA1D-202ENST00000350061 PPARGC1BQ86YN6 1023 aaKnown RBP14.57□□□□□ -0.08
CACNA1D-202ENST00000350061 SHROOM4Q9ULL8 1493 aa14.52□□□□□ -0.08
CACNA1D-202ENST00000350061 ZEB1P37275 1124 aaPredicted RBP14.52□□□□□ -0.09
CACNA1D-202ENST00000350061 TRIM26Q12899 539 aaPredicted RBP14.47□□□□□ -0.09
CACNA1D-202ENST00000350061 MYO15BQ96JP2 1530 aa14.43□□□□□ -0.1
CACNA1D-202ENST00000350061 ZCCHC6Q5VYS8 1495 aaKnown RBP14.41□□□□□ -0.1
CACNA1D-202ENST00000350061 MYT1Q01538 1121 aa14.4□□□□□ -0.1
CACNA1D-202ENST00000350061 SCAF1Q9H7N4 1312 aaKnown RBP14.25□□□□□ -0.13
CACNA1D-202ENST00000350061 LOC105371045A0A1W2PR82 267 aa14.21□□□□□ -0.14
CACNA1D-202ENST00000350061 ACIN1Q9UKV3 1341 aaKnown RBP14.1□□□□□ -0.15
CACNA1D-202ENST00000350061 NEUROD1Q13562 356 aa13.98□□□□□ -0.17
CACNA1D-202ENST00000350061 CENPBP07199 599 aaPredicted RBP13.94□□□□□ -0.18
CACNA1D-202ENST00000350061 CCDC180Q9P1Z9 1646 aa13.91□□□□□ -0.18
CACNA1D-202ENST00000350061 TRIM41Q8WV44 630 aa13.84□□□□□ -0.19
CACNA1D-202ENST00000350061 GTF3C3Q9Y5Q9 886 aa13.79□□□□□ -0.2
CACNA1D-202ENST00000350061 RSF1Q96T23 1441 aaPredicted RBP13.78□□□□□ -0.2
CACNA1D-202ENST00000350061 DIEXFQ68CQ4 756 aaKnown RBP13.72□□□□□ -0.21
CACNA1D-202ENST00000350061 WRNQ14191 1432 aaPredicted RBP eCLIP13.67□□□□□ -0.22
CACNA1D-202ENST00000350061 TTBK1Q5TCY1 1321 aaPredicted RBP13.66□□□□□ -0.22
CACNA1D-202ENST00000350061 CLSPNQ9HAW4 1339 aa13.64□□□□□ -0.23
CACNA1D-202ENST00000350061 CCER1Q8TC90 406 aaPredicted RBP13.62□□□□□ -0.23
CACNA1D-202ENST00000350061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.6□□□□□ -0.23
CACNA1D-202ENST00000350061 ZNF316A6NFI3 1004 aaPredicted RBP13.58□□□□□ -0.24
CACNA1D-202ENST00000350061 FAM9AQ8IZU1 332 aaPredicted RBP13.57□□□□□ -0.24
CACNA1D-202ENST00000350061 TNIKQ9UKE5 1360 aa13.43□□□□□ -0.26
CACNA1D-202ENST00000350061 EEA1Q15075 1411 aa13.41□□□□□ -0.26
CACNA1D-202ENST00000350061 ABCC9O60706 1549 aa13.4□□□□□ -0.27
CACNA1D-202ENST00000350061 MIER1Q8N108 512 aa13.37□□□□□ -0.27
CACNA1D-202ENST00000350061 CSRNP3Q8WYN3 585 aa13.36□□□□□ -0.27
CACNA1D-202ENST00000350061 APLP2Q06481 763 aa13.34□□□□□ -0.27
CACNA1D-202ENST00000350061 RB1CC1Q8TDY2 1594 aa13.29□□□□□ -0.28
CACNA1D-202ENST00000350061 CEP162Q5TB80 1403 aa13.28□□□□□ -0.28
CACNA1D-202ENST00000350061 ANP32EQ9BTT0 268 aa13.27□□□□□ -0.29
CACNA1D-202ENST00000350061 TSHZ2Q9NRE2 1034 aa13.24□□□□□ -0.29
CACNA1D-202ENST00000350061 SUPT16HQ9Y5B9 1047 aaKnown RBP13.2□□□□□ -0.3
CACNA1D-202ENST00000350061 CECR2Q9BXF3 1484 aa13.2□□□□□ -0.3
CACNA1D-202ENST00000350061 YTHDC1Q96MU7 727 aaKnown RBP13.11□□□□□ -0.31
CACNA1D-202ENST00000350061 EHMT2Q96KQ7 1210 aa13.11□□□□□ -0.31
CACNA1D-202ENST00000350061 BCL11AQ9H165 835 aa13.1□□□□□ -0.31
CACNA1D-202ENST00000350061 VPS8Q8N3P4 1428 aa13.09□□□□□ -0.31
CACNA1D-202ENST00000350061 MROH2BQ7Z745 1585 aa13.07□□□□□ -0.32
CACNA1D-202ENST00000350061 TIMELESSQ9UNS1 1208 aa13.07□□□□□ -0.32
CACNA1D-202ENST00000350061 DHX57Q6P158 1386 aaKnown RBP13.05□□□□□ -0.32
CACNA1D-202ENST00000350061 CCDC88BA6NC98 1476 aa13.04□□□□□ -0.32
CACNA1D-202ENST00000350061 SOGA1O94964 1423 aa13.04□□□□□ -0.32
CACNA1D-202ENST00000350061 UBTFP17480 764 aaKnown RBP13.02□□□□□ -0.32
CACNA1D-202ENST00000350061 CLIP1P30622 1438 aa13.02□□□□□ -0.33
CACNA1D-202ENST00000350061 HNRNPUL2Q1KMD3 747 aaKnown RBP13.01□□□□□ -0.33
CACNA1D-202ENST00000350061 GOLGA3Q08378 1498 aa13□□□□□ -0.33
CACNA1D-202ENST00000350061 CEP164Q9UPV0 1460 aa12.94□□□□□ -0.34
CACNA1D-202ENST00000350061 MYT1LQ9UL68 1186 aa12.92□□□□□ -0.34
CACNA1D-202ENST00000350061 BAZ1AQ9NRL2 1556 aaPredicted RBP12.9□□□□□ -0.34
CACNA1D-202ENST00000350061 CUX2O14529 1486 aa12.9□□□□□ -0.34
CACNA1D-202ENST00000350061 CCER2I3L3R5 266 aa12.89□□□□□ -0.35
CACNA1D-202ENST00000350061 RBM19Q9Y4C8 960 aaKnown RBP12.89□□□□□ -0.35
CACNA1D-202ENST00000350061 FANCIQ9NVI1 1328 aa12.89□□□□□ -0.35
CACNA1D-202ENST00000350061 ERICH6BQ5W0A0 696 aa12.89□□□□□ -0.35
CACNA1D-202ENST00000350061 EIF4G1Q04637 1599 aaKnown RBP12.87□□□□□ -0.35
CACNA1D-202ENST00000350061 RRBP1Q9P2E9 1410 aaKnown RBP12.81□□□□□ -0.36
CACNA1D-202ENST00000350061 RUSC2Q8N2Y8 1516 aa12.81□□□□□ -0.36
CACNA1D-202ENST00000350061 BAZ1BQ9UIG0 1483 aaKnown RBP12.81□□□□□ -0.36
CACNA1D-202ENST00000350061 PPP1R15AO75807 674 aaPredicted RBP12.77□□□□□ -0.37
CACNA1D-202ENST00000350061 NACADO15069 1562 aa12.76□□□□□ -0.37
CACNA1D-202ENST00000350061 NEFLP07196 543 aa12.75□□□□□ -0.37
CACNA1D-202ENST00000350061 PRXQ9BXM0 1461 aa12.75□□□□□ -0.37
CACNA1D-202ENST00000350061 FKBP8Q14318 412 aa12.74□□□□□ -0.37
CACNA1D-202ENST00000350061 CCNB3Q8WWL7 1395 aa12.73□□□□□ -0.37
CACNA1D-202ENST00000350061 MSH5O43196 834 aa12.71□□□□□ -0.38
CACNA1D-202ENST00000350061 KANK4Q5T7N3 995 aaPredicted RBP12.7□□□□□ -0.38
CACNA1D-202ENST00000350061 TOP2AP11388 1531 aaKnown RBP12.7□□□□□ -0.38
CACNA1D-202ENST00000350061 SCRIBQ14160 1630 aa12.7□□□□□ -0.38
CACNA1D-202ENST00000350061 KCNH8Q96L42 1107 aa12.68□□□□□ -0.38
CACNA1D-202ENST00000350061 RANGAP1P46060 587 aaPredicted RBP12.66□□□□□ -0.38
CACNA1D-202ENST00000350061 ABCC8Q09428 1581 aa12.64□□□□□ -0.39
CACNA1D-202ENST00000350061 DDX10Q13206 875 aaKnown RBP12.63□□□□□ -0.39
CACNA1D-202ENST00000350061 RAPGEF2Q9Y4G8 1499 aa12.63□□□□□ -0.39
CACNA1D-202ENST00000350061 KIF21BO75037 1637 aa12.62□□□□□ -0.39
CACNA1D-202ENST00000350061 ATP1B4Q9UN42 357 aaPredicted RBP12.6□□□□□ -0.39
CACNA1D-202ENST00000350061 RAB3GAP2Q9H2M9 1393 aa12.59□□□□□ -0.39
CACNA1D-202ENST00000350061 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.59□□□□□ -0.39
CACNA1D-202ENST00000350061 PRKCSHP14314 528 aaPredicted RBP12.59□□□□□ -0.39
CACNA1D-202ENST00000350061 SMARCA2P51531 1590 aa12.59□□□□□ -0.39
CACNA1D-202ENST00000350061 BCANQ96GW7 911 aa12.59□□□□□ -0.39
CACNA1D-202ENST00000350061 ARAP1Q96P48 1450 aa12.58□□□□□ -0.4
CACNA1D-202ENST00000350061 TRIM52Q96A61 297 aa12.56□□□□□ -0.4
CACNA1D-202ENST00000350061 PPP4R2Q9NY27 417 aa12.55□□□□□ -0.4
CACNA1D-202ENST00000350061 ANP32CO43423 234 aa12.54□□□□□ -0.4
CACNA1D-202ENST00000350061 ERICH6Q7L0X2 663 aa12.53□□□□□ -0.4
CACNA1D-202ENST00000350061 C11orf95C9JLR9 678 aaPredicted RBP12.52□□□□□ -0.4
CACNA1D-202ENST00000350061 SETD5Q9C0A6 1442 aa12.52□□□□□ -0.41
CACNA1D-202ENST00000350061 MAP3K1Q13233 1512 aa12.52□□□□□ -0.41
CACNA1D-202ENST00000350061 CDK11AQ9UQ88 783 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms