RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 NISCHQ9Y2I1 1504 aa16.65■□□□□ 0.26
CDH23-203ENST00000398788 DCAF8L2P0C7V8 631 aa16.22■□□□□ 0.19
CDH23-203ENST00000398788 PELP1Q8IZL8 1130 aaKnown RBP15.68■□□□□ 0.1
CDH23-203ENST00000398788 SUPT5HO00267 1087 aaKnown RBP15.44■□□□□ 0.06
CDH23-203ENST00000398788 MYT1Q01538 1121 aa15.31■□□□□ 0.04
CDH23-203ENST00000398788 SHROOM4Q9ULL8 1493 aa15.16■□□□□ 0.02
CDH23-203ENST00000398788 HRCP23327 699 aa15.13■□□□□ 0.01
CDH23-203ENST00000398788 EHMT2Q96KQ7 1210 aa15.1■□□□□ 0.01
CDH23-203ENST00000398788 PCGF6Q9BYE7 350 aa15.08■□□□□ 0
CDH23-203ENST00000398788 PPARGC1BQ86YN6 1023 aaKnown RBP15.03■□□□□ -0
CDH23-203ENST00000398788 FAM9AQ8IZU1 332 aaPredicted RBP14.62□□□□□ -0.07
CDH23-203ENST00000398788 SCAF1Q9H7N4 1312 aaKnown RBP14.57□□□□□ -0.08
CDH23-203ENST00000398788 CCDC180Q9P1Z9 1646 aa14.54□□□□□ -0.08
CDH23-203ENST00000398788 TTBK1Q5TCY1 1321 aaPredicted RBP14.54□□□□□ -0.08
CDH23-203ENST00000398788 CENPBP07199 599 aaPredicted RBP14.5□□□□□ -0.09
CDH23-203ENST00000398788 GTF3C3Q9Y5Q9 886 aa14.37□□□□□ -0.11
CDH23-203ENST00000398788 ZEB1P37275 1124 aaPredicted RBP14.34□□□□□ -0.11
CDH23-203ENST00000398788 RANGAP1P46060 587 aaPredicted RBP14.33□□□□□ -0.11
CDH23-203ENST00000398788 APLP2Q06481 763 aa14.29□□□□□ -0.12
CDH23-203ENST00000398788 YTHDC1Q96MU7 727 aaKnown RBP14.28□□□□□ -0.12
CDH23-203ENST00000398788 ACIN1Q9UKV3 1341 aaKnown RBP14.23□□□□□ -0.13
CDH23-203ENST00000398788 TRIM26Q12899 539 aaPredicted RBP14.14□□□□□ -0.15
CDH23-203ENST00000398788 NEUROD1Q13562 356 aa14.14□□□□□ -0.15
CDH23-203ENST00000398788 TRIM41Q8WV44 630 aa14.11□□□□□ -0.15
CDH23-203ENST00000398788 BCL11AQ9H165 835 aa14.11□□□□□ -0.15
CDH23-203ENST00000398788 ABCC9O60706 1549 aa14.08□□□□□ -0.16
CDH23-203ENST00000398788 ATP1B4Q9UN42 357 aaPredicted RBP14.04□□□□□ -0.16
CDH23-203ENST00000398788 CCER1Q8TC90 406 aaPredicted RBP14□□□□□ -0.17
CDH23-203ENST00000398788 UBTFP17480 764 aaKnown RBP13.97□□□□□ -0.17
CDH23-203ENST00000398788 LOC105371045A0A1W2PR82 267 aa13.96□□□□□ -0.17
CDH23-203ENST00000398788 DIEXFQ68CQ4 756 aaKnown RBP13.95□□□□□ -0.18
CDH23-203ENST00000398788 ZCCHC6Q5VYS8 1495 aaKnown RBP13.93□□□□□ -0.18
CDH23-203ENST00000398788 ERICH6Q7L0X2 663 aa13.93□□□□□ -0.18
CDH23-203ENST00000398788 CHIC1Q5VXU3 224 aa13.9□□□□□ -0.18
CDH23-203ENST00000398788 PRKCSHP14314 528 aaPredicted RBP13.77□□□□□ -0.2
CDH23-203ENST00000398788 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
CDH23-203ENST00000398788 ANP32EQ9BTT0 268 aa13.76□□□□□ -0.21
CDH23-203ENST00000398788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.76□□□□□ -0.21
CDH23-203ENST00000398788 DCAF1Q9Y4B6 1507 aa13.69□□□□□ -0.22
CDH23-203ENST00000398788 ITGAEP38570 1179 aa13.67□□□□□ -0.22
CDH23-203ENST00000398788 NACADO15069 1562 aa13.62□□□□□ -0.23
CDH23-203ENST00000398788 BCANQ96GW7 911 aa13.62□□□□□ -0.23
CDH23-203ENST00000398788 CSRNP3Q8WYN3 585 aa13.62□□□□□ -0.23
CDH23-203ENST00000398788 MYO15BQ96JP2 1530 aa13.59□□□□□ -0.23
CDH23-203ENST00000398788 RB1CC1Q8TDY2 1594 aa13.57□□□□□ -0.24
CDH23-203ENST00000398788 HNRNPUL2Q1KMD3 747 aaKnown RBP13.55□□□□□ -0.24
CDH23-203ENST00000398788 CNGB1Q14028 1251 aaPredicted RBP13.53□□□□□ -0.24
CDH23-203ENST00000398788 NEFLP07196 543 aa13.52□□□□□ -0.25
CDH23-203ENST00000398788 POLR3GLQ9BT43 218 aa13.47□□□□□ -0.25
CDH23-203ENST00000398788 SCRIBQ14160 1630 aa13.46□□□□□ -0.26
CDH23-203ENST00000398788 ZNF316A6NFI3 1004 aaPredicted RBP13.42□□□□□ -0.26
CDH23-203ENST00000398788 MYT1LQ9UL68 1186 aa13.38□□□□□ -0.27
CDH23-203ENST00000398788 MIER1Q8N108 512 aa13.37□□□□□ -0.27
CDH23-203ENST00000398788 EIF5BO60841 1220 aaKnown RBP13.35□□□□□ -0.27
CDH23-203ENST00000398788 TSHZ2Q9NRE2 1034 aa13.31□□□□□ -0.28
CDH23-203ENST00000398788 SUPT16HQ9Y5B9 1047 aaKnown RBP13.3□□□□□ -0.28
CDH23-203ENST00000398788 UNC13AQ9UPW8 1703 aa13.28□□□□□ -0.28
CDH23-203ENST00000398788 RTL5Q5HYW3 569 aaPredicted RBP13.27□□□□□ -0.28
CDH23-203ENST00000398788 FKBP8Q14318 412 aa13.25□□□□□ -0.29
CDH23-203ENST00000398788 CCDC136Q96JN2 1154 aa13.24□□□□□ -0.29
CDH23-203ENST00000398788 ANO8Q9HCE9 1232 aaPredicted RBP13.22□□□□□ -0.29
CDH23-203ENST00000398788 NBR1Q14596 966 aa13.22□□□□□ -0.29
CDH23-203ENST00000398788 RTN4Q9NQC3 1192 aaKnown RBP13.21□□□□□ -0.29
CDH23-203ENST00000398788 CLSPNQ9HAW4 1339 aa13.2□□□□□ -0.3
CDH23-203ENST00000398788 FAM50AQ14320 339 aaKnown RBP13.17□□□□□ -0.3
CDH23-203ENST00000398788 BICRAQ9NZM4 1560 aa13.17□□□□□ -0.3
CDH23-203ENST00000398788 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.16□□□□□ -0.3
CDH23-203ENST00000398788 FBLN2P98095 1184 aa13.15□□□□□ -0.3
CDH23-203ENST00000398788 DEKP35659 375 aaKnown RBP13.14□□□□□ -0.31
CDH23-203ENST00000398788 CDK11AQ9UQ88 783 aaPredicted RBP13.14□□□□□ -0.31
CDH23-203ENST00000398788 RBM19Q9Y4C8 960 aaKnown RBP13.12□□□□□ -0.31
CDH23-203ENST00000398788 SLC4A1APQ9BWU0 796 aaKnown RBP13.11□□□□□ -0.31
CDH23-203ENST00000398788 TRIM52Q96A61 297 aa13.07□□□□□ -0.32
CDH23-203ENST00000398788 ARID3CA6NKF2 412 aa13.05□□□□□ -0.32
CDH23-203ENST00000398788 P3H3Q8IVL6 736 aa13.04□□□□□ -0.32
CDH23-203ENST00000398788 ZNF326Q5BKZ1 582 aaKnown RBP13.02□□□□□ -0.32
CDH23-203ENST00000398788 SALL2Q9Y467 1007 aaPredicted RBP13.01□□□□□ -0.33
CDH23-203ENST00000398788 CECR2Q9BXF3 1484 aa13□□□□□ -0.33
CDH23-203ENST00000398788 DAXXQ9UER7 740 aaPredicted RBP12.98□□□□□ -0.33
CDH23-203ENST00000398788 GLIPR1L2Q4G1C9 344 aa12.92□□□□□ -0.34
CDH23-203ENST00000398788 IRX6P78412 446 aaPredicted RBP12.91□□□□□ -0.34
CDH23-203ENST00000398788 MROH2BQ7Z745 1585 aa12.88□□□□□ -0.35
CDH23-203ENST00000398788 RSF1Q96T23 1441 aaPredicted RBP12.86□□□□□ -0.35
CDH23-203ENST00000398788 BAZ1AQ9NRL2 1556 aaPredicted RBP12.86□□□□□ -0.35
CDH23-203ENST00000398788 ANP32AP39687 249 aaKnown RBP12.85□□□□□ -0.35
CDH23-203ENST00000398788 SMARCA4P51532 1647 aa12.84□□□□□ -0.35
CDH23-203ENST00000398788 NPM2Q86SE8 214 aaKnown RBP12.82□□□□□ -0.36
CDH23-203ENST00000398788 ERICH6BQ5W0A0 696 aa12.81□□□□□ -0.36
CDH23-203ENST00000398788 EIF4G1Q04637 1599 aaKnown RBP12.81□□□□□ -0.36
CDH23-203ENST00000398788 ANP32CO43423 234 aa12.79□□□□□ -0.36
CDH23-203ENST00000398788 ZBTB47Q9UFB7 747 aaPredicted RBP12.79□□□□□ -0.36
CDH23-203ENST00000398788 ZNF777Q9ULD5 760 aaPredicted RBP12.79□□□□□ -0.36
CDH23-203ENST00000398788 PKNOX2Q96KN3 472 aa12.79□□□□□ -0.36
CDH23-203ENST00000398788 NOP58Q9Y2X3 529 aaKnown RBP12.78□□□□□ -0.36
CDH23-203ENST00000398788 WIZO95785 1651 aa12.77□□□□□ -0.37
CDH23-203ENST00000398788 IL27Q8NEV9 243 aa12.76□□□□□ -0.37
CDH23-203ENST00000398788 UBE2Q2Q8WVN8 375 aa12.74□□□□□ -0.37
CDH23-203ENST00000398788 MSH5O43196 834 aa12.74□□□□□ -0.37
CDH23-203ENST00000398788 DDX10Q13206 875 aaKnown RBP12.72□□□□□ -0.37
CDH23-203ENST00000398788 TIMELESSQ9UNS1 1208 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms