Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXD12P35452 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXD12P35452 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXD12P35452 AC109315.1-201ENST00000584143 1347 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXD12P35452 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXD12P35452 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
HOXD12P35452 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HOXD12P35452 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXD12P35452 RNA5SP388-201ENST00000362584 119 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 SNORA71.2-201ENST00000364941 134 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 RPEP3-201ENST00000425462 676 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXD12P35452 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXD12P35452 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXD12P35452 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXD12P35452 MTCYBP3-201ENST00000445588 1137 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 AC239367.2-201ENST00000447309 705 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 RPS27AP15-201ENST00000447672 466 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXD12P35452 BX276092.4-201ENST00000452056 248 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 AL691482.1-201ENST00000453255 87 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 AC073387.1-201ENST00000453261 709 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXD12P35452 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXD12P35452 AC005008.1-201ENST00000456151 612 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 TPTE2P5-203ENST00000458118 728 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 RPL31P3-201ENST00000458430 332 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 SNORD108-201ENST00000459332 71 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 AP000893.1-201ENST00000474462 794 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 AC087385.1-201ENST00000475062 312 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 MTCYBP16-201ENST00000509187 1129 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 KRT19P6-201ENST00000510983 209 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 AC109471.1-201ENST00000511631 612 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 AC090281.1-201ENST00000523019 276 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXD12P35452 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXD12P35452 UBE2NP1-201ENST00000545592 458 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXD12P35452 MIR4504-201ENST00000577413 92 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HOXD12P35452 AC023575.1-201ENST00000580510 358 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXD12P35452 AC009220.3-201ENST00000604318 586 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 AP004247.3-201ENST00000608682 624 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 AC072039.2-201ENST00000608883 439 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 AC097505.1-201ENST00000610199 565 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 AC069209.1-201ENST00000619282 651 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 BX005214.3-202ENST00000619809 325 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HOXD12P35452 AL049536.1-201ENST00000625043 744 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXD12P35452 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXD12P35452 OR52H1-202ENST00000641796 1061 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXD12P35452 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXD12P35452 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXD12P35452 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXD12P35452 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXD12P35452 ZNF137P-201ENST00000456718 1920 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.72□□□□□ -1.65
HOXD12P35452 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HOXD12P35452 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HOXD12P35452 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXD12P35452 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXD12P35452 AL445523.1-201ENST00000451184 1362 ntBASIC4.71□□□□□ -1.66
HOXD12P35452 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXD12P35452 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXD12P35452 RNU6-553P-201ENST00000364047 96 ntBASIC4.71□□□□□ -1.66
HOXD12P35452 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXD12P35452 MIR217-201ENST00000384817 110 ntBASIC4.71□□□□□ -1.66
HOXD12P35452 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.71□□□□□ -1.66
HOXD12P35452 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXD12P35452 AL161909.1-201ENST00000397390 712 ntBASIC4.71□□□□□ -1.66
HOXD12P35452 RPL23AP48-201ENST00000406913 488 ntBASIC4.71□□□□□ -1.66
HOXD12P35452 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXD12P35452 AC140479.3-201ENST00000418944 1126 ntBASIC4.71□□□□□ -1.66
HOXD12P35452 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXD12P35452 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXD12P35452 Z93242.1-201ENST00000427102 353 ntBASIC4.71□□□□□ -1.66
HOXD12P35452 OR4F13P-201ENST00000428478 931 ntBASIC4.71□□□□□ -1.66
HOXD12P35452 RPS17P8-201ENST00000434525 335 ntBASIC4.71□□□□□ -1.66
HOXD12P35452 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXD12P35452 ISCA1P2-201ENST00000438679 421 ntBASIC4.71□□□□□ -1.66
HOXD12P35452 AC069285.2-201ENST00000440210 275 ntBASIC4.71□□□□□ -1.66
HOXD12P35452 AL591503.2-201ENST00000442314 1005 ntBASIC4.71□□□□□ -1.66
HOXD12P35452 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXD12P35452 AL606662.1-201ENST00000445763 553 ntBASIC4.71□□□□□ -1.66
HOXD12P35452 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXD12P35452 AL121877.1-201ENST00000453704 622 ntBASIC4.71□□□□□ -1.66
HOXD12P35452 HMGN3P1-201ENST00000453847 193 ntBASIC4.71□□□□□ -1.66
HOXD12P35452 AC011276.1-201ENST00000469688 323 ntBASIC4.71□□□□□ -1.66
HOXD12P35452 RPS6P4-201ENST00000494693 758 ntBASIC4.71□□□□□ -1.66
HOXD12P35452 PRELID3BP7-201ENST00000503606 469 ntBASIC4.71□□□□□ -1.66
HOXD12P35452 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXD12P35452 AC025674.1-201ENST00000507074 324 ntBASIC4.71□□□□□ -1.66
HOXD12P35452 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXD12P35452 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXD12P35452 AC048346.1-201ENST00000510247 144 ntBASIC4.71□□□□□ -1.66
HOXD12P35452 RNU6-1225P-201ENST00000516336 65 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms