RNA–Protein interactions for RNA: ENST00000504394.1

AC002460.1-201, humanhuman

TSL 3 BASIC

Gene AC002460.1, Length 370 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002460.1-201ENST00000504394 AEBP2Q6ZN18 517 aaPredicted RBP20.1■□□□□ 0.81
AC002460.1-201ENST00000504394 CHIC1Q5VXU3 224 aa19.62■□□□□ 0.73
AC002460.1-201ENST00000504394 PHF23Q9BUL5 403 aaPredicted RBP17.33■□□□□ 0.36
AC002460.1-201ENST00000504394 SENP3Q9H4L4 574 aaPredicted RBP16.94■□□□□ 0.3
AC002460.1-201ENST00000504394 PLPPR3Q6T4P5 718 aa15.9■□□□□ 0.14
AC002460.1-201ENST00000504394 FOXD1Q16676 465 aa15.77■□□□□ 0.12
AC002460.1-201ENST00000504394 PPP6R1Q9UPN7 881 aa15.25■□□□□ 0.03
AC002460.1-201ENST00000504394 ADRA2BP18089 450 aa15.19■□□□□ 0.02
AC002460.1-201ENST00000504394 PIAS4Q8N2W9 510 aaPredicted RBP14.81□□□□□ -0.04
AC002460.1-201ENST00000504394 MSH5O43196 834 aa14.45□□□□□ -0.1
AC002460.1-201ENST00000504394 PPP4R3CPQ6ZMV5 832 aa14.03□□□□□ -0.16
AC002460.1-201ENST00000504394 KCNA4P22459 653 aa13.8□□□□□ -0.2
AC002460.1-201ENST00000504394 MAPK8IP2Q13387 824 aaPredicted RBP13.78□□□□□ -0.2
AC002460.1-201ENST00000504394 SCAF1Q9H7N4 1312 aaKnown RBP13.78□□□□□ -0.2
AC002460.1-201ENST00000504394 CNKSR2Q8WXI2 1034 aa13.62□□□□□ -0.23
AC002460.1-201ENST00000504394 NCBP3Q53F19 620 aaKnown RBP13.6□□□□□ -0.23
AC002460.1-201ENST00000504394 DMRT2Q9Y5R5 561 aa13.58□□□□□ -0.24
AC002460.1-201ENST00000504394 NPM3O75607 178 aaKnown RBP13.52□□□□□ -0.25
AC002460.1-201ENST00000504394 RNF216Q9NWF9 866 aaPredicted RBP13.36□□□□□ -0.27
AC002460.1-201ENST00000504394 HOXD11P31277 338 aaPredicted RBP13.33□□□□□ -0.28
AC002460.1-201ENST00000504394 DNAJC5BQ9UF47 199 aa13.2□□□□□ -0.3
AC002460.1-201ENST00000504394 POTEDQ86YR6 584 aa13.13□□□□□ -0.31
AC002460.1-201ENST00000504394 SLC4A1APQ9BWU0 796 aaKnown RBP13.09□□□□□ -0.31
AC002460.1-201ENST00000504394 DCAF8L1A6NGE4 600 aa12.83□□□□□ -0.36
AC002460.1-201ENST00000504394 SLC4A2P04920 1241 aa12.79□□□□□ -0.36
AC002460.1-201ENST00000504394 ZBTB22O15209 634 aa12.77□□□□□ -0.37
AC002460.1-201ENST00000504394 EHMT2Q96KQ7 1210 aa12.75□□□□□ -0.37
AC002460.1-201ENST00000504394 CSRNP3Q8WYN3 585 aa12.68□□□□□ -0.38
AC002460.1-201ENST00000504394 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
AC002460.1-201ENST00000504394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.58□□□□□ -0.4
AC002460.1-201ENST00000504394 U3KPZ7 1027 aaPredicted RBP12.5□□□□□ -0.41
AC002460.1-201ENST00000504394 RNF39Q9H2S5 420 aa12.46□□□□□ -0.41
AC002460.1-201ENST00000504394 MYCNP04198 464 aaPredicted RBP12.43□□□□□ -0.42
AC002460.1-201ENST00000504394 C1QBPQ07021 282 aaKnown RBP12.26□□□□□ -0.45
AC002460.1-201ENST00000504394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.23□□□□□ -0.45
AC002460.1-201ENST00000504394 HNRNPUL2Q1KMD3 747 aaKnown RBP12.23□□□□□ -0.45
AC002460.1-201ENST00000504394 SAMD1Q6SPF0 538 aaPredicted RBP12.23□□□□□ -0.45
AC002460.1-201ENST00000504394 ATXN8OSP0DMR3 200 aa12.21□□□□□ -0.45
AC002460.1-201ENST00000504394 ATF5Q9Y2D1 282 aaPredicted RBP12.18□□□□□ -0.46
AC002460.1-201ENST00000504394 SPINK5Q9NQ38 1064 aaPredicted RBP12.12□□□□□ -0.47
AC002460.1-201ENST00000504394 APLP2Q06481 763 aa12.06□□□□□ -0.48
AC002460.1-201ENST00000504394 CACNB1Q02641 598 aaPredicted RBP11.99□□□□□ -0.49
AC002460.1-201ENST00000504394 CAPN15O75808 1086 aa11.97□□□□□ -0.49
AC002460.1-201ENST00000504394 ZNF219Q9P2Y4 722 aaPredicted RBP11.95□□□□□ -0.5
AC002460.1-201ENST00000504394 TRHP20396 242 aaPredicted RBP11.93□□□□□ -0.5
AC002460.1-201ENST00000504394 DSG3P32926 999 aa11.86□□□□□ -0.51
AC002460.1-201ENST00000504394 ABCB7O75027 752 aa11.79□□□□□ -0.52
AC002460.1-201ENST00000504394 POLA2Q14181 598 aa11.79□□□□□ -0.52
AC002460.1-201ENST00000504394 MKRN4PQ13434 485 aaPredicted RBP11.67□□□□□ -0.54
AC002460.1-201ENST00000504394 ZBTB12Q9Y330 459 aaPredicted RBP11.56□□□□□ -0.56
AC002460.1-201ENST00000504394 FBLN2P98095 1184 aa11.51□□□□□ -0.57
AC002460.1-201ENST00000504394 OSCARQ8IYS5 282 aa11.41□□□□□ -0.58
AC002460.1-201ENST00000504394 FKBP8Q14318 412 aa11.38□□□□□ -0.59
AC002460.1-201ENST00000504394 SPDYE4A6NLX3 237 aa11.33□□□□□ -0.6
AC002460.1-201ENST00000504394 SPDYE2BA6NHP3 402 aa11.3□□□□□ -0.6
AC002460.1-201ENST00000504394 SPDYE6P0CI01 402 aa11.3□□□□□ -0.6
AC002460.1-201ENST00000504394 SPDYE2Q495Y8 402 aa11.3□□□□□ -0.6
AC002460.1-201ENST00000504394 PROM2Q8N271 834 aa11.28□□□□□ -0.6
AC002460.1-201ENST00000504394 SSUH2Q9Y2M2 353 aa11.28□□□□□ -0.6
AC002460.1-201ENST00000504394 ZNF692Q9BU19 519 aaPredicted RBP11.22□□□□□ -0.61
AC002460.1-201ENST00000504394 RBM42Q9BTD8 480 aaKnown RBP11.21□□□□□ -0.61
AC002460.1-201ENST00000504394 AKT1S1Q96B36 256 aa11.13□□□□□ -0.63
AC002460.1-201ENST00000504394 PABPN1Q86U42 306 aaKnown RBP eCLIP11.1□□□□□ -0.63
AC002460.1-201ENST00000504394 REM2Q8IYK8 340 aaPredicted RBP11.04□□□□□ -0.64
AC002460.1-201ENST00000504394 PITPNM1O00562 1244 aa10.93□□□□□ -0.66
AC002460.1-201ENST00000504394 SPDYE1Q8NFV5 336 aaPredicted RBP10.92□□□□□ -0.66
AC002460.1-201ENST00000504394 FBXO3Q9UK99 471 aa10.91□□□□□ -0.66
AC002460.1-201ENST00000504394 STAG3Q9UJ98 1225 aa10.88□□□□□ -0.67
AC002460.1-201ENST00000504394 VASPP50552 380 aaPredicted RBP10.84□□□□□ -0.67
AC002460.1-201ENST00000504394 CLEC11AQ9Y240 323 aa10.82□□□□□ -0.68
AC002460.1-201ENST00000504394 CHRDL2Q6WN34 429 aa10.77□□□□□ -0.69
AC002460.1-201ENST00000504394 PRR29P0C7W0 189 aa10.75□□□□□ -0.69
AC002460.1-201ENST00000504394 FXR2P51116 673 aaKnown RBP eCLIP10.73□□□□□ -0.69
AC002460.1-201ENST00000504394 IFNLR1Q8IU57 520 aaPredicted RBP10.73□□□□□ -0.69
AC002460.1-201ENST00000504394 CREBZFQ9NS37 354 aa10.73□□□□□ -0.69
AC002460.1-201ENST00000504394 MNX1P50219 401 aaPredicted RBP10.68□□□□□ -0.7
AC002460.1-201ENST00000504394 MIER1Q8N108 512 aa10.68□□□□□ -0.7
AC002460.1-201ENST00000504394 PIP4P2Q8N4L2 257 aa10.68□□□□□ -0.7
AC002460.1-201ENST00000504394 PLCD3Q8N3E9 789 aa10.66□□□□□ -0.7
AC002460.1-201ENST00000504394 CHADLQ6NUI6 762 aa10.63□□□□□ -0.71
AC002460.1-201ENST00000504394 PRKAR2AP13861 404 aaKnown RBP10.6□□□□□ -0.71
AC002460.1-201ENST00000504394 PLEKHG5O94827 1062 aa10.54□□□□□ -0.72
AC002460.1-201ENST00000504394 FARP1Q9Y4F1 1045 aaPredicted RBP10.54□□□□□ -0.72
AC002460.1-201ENST00000504394 KLHL34Q8N239 644 aa10.53□□□□□ -0.72
AC002460.1-201ENST00000504394 ZBTB47Q9UFB7 747 aaPredicted RBP10.53□□□□□ -0.72
AC002460.1-201ENST00000504394 NUBP1P53384 320 aa10.52□□□□□ -0.73
AC002460.1-201ENST00000504394 SPOCK2Q92563 424 aa10.52□□□□□ -0.73
AC002460.1-201ENST00000504394 RTN4Q9NQC3 1192 aaKnown RBP10.48□□□□□ -0.73
AC002460.1-201ENST00000504394 RASEFQ8IZ41 740 aa10.45□□□□□ -0.74
AC002460.1-201ENST00000504394 NPM1P06748 294 aaKnown RBP eCLIP10.44□□□□□ -0.74
AC002460.1-201ENST00000504394 AMER1Q5JTC6 1135 aaPredicted RBP10.44□□□□□ -0.74
AC002460.1-201ENST00000504394 PKD2Q13563 968 aa10.41□□□□□ -0.74
AC002460.1-201ENST00000504394 POTEHQ6S545 545 aa10.37□□□□□ -0.75
AC002460.1-201ENST00000504394 C19orf67A6NJJ6 358 aa10.36□□□□□ -0.75
AC002460.1-201ENST00000504394 FAM212AQ96EL1 285 aa10.33□□□□□ -0.76
AC002460.1-201ENST00000504394 GSE1Q14687 1217 aa10.32□□□□□ -0.76
AC002460.1-201ENST00000504394 CCDC61Q9Y6R9 512 aa10.31□□□□□ -0.76
AC002460.1-201ENST00000504394 CD44P16070 742 aaKnown RBP10.3□□□□□ -0.76
AC002460.1-201ENST00000504394 CIZ1Q9ULV3 898 aaPredicted RBP10.3□□□□□ -0.76
AC002460.1-201ENST00000504394 DCAF8Q5TAQ9 597 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms