RNA–Protein interactions for RNA: ENST00000516336.1

RNU6-1225P-201, Transcript of RNA, U6 small nuclear 1225, pseudogene, humanhuman

BASIC

Gene RNU6-1225P, Length 65 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1225P-201ENST00000516336 AEBP2Q6ZN18 517 aaPredicted RBP19.6■□□□□ 0.73
RNU6-1225P-201ENST00000516336 CHIC1Q5VXU3 224 aa19.43■□□□□ 0.7
RNU6-1225P-201ENST00000516336 PHF23Q9BUL5 403 aaPredicted RBP17.13■□□□□ 0.33
RNU6-1225P-201ENST00000516336 SENP3Q9H4L4 574 aaPredicted RBP16.57■□□□□ 0.24
RNU6-1225P-201ENST00000516336 PLPPR3Q6T4P5 718 aa15.92■□□□□ 0.14
RNU6-1225P-201ENST00000516336 FOXD1Q16676 465 aa15.35■□□□□ 0.05
RNU6-1225P-201ENST00000516336 ADRA2BP18089 450 aa15.02■□□□□ -0
RNU6-1225P-201ENST00000516336 PPP6R1Q9UPN7 881 aa15.02■□□□□ -0
RNU6-1225P-201ENST00000516336 PIAS4Q8N2W9 510 aaPredicted RBP14.56□□□□□ -0.08
RNU6-1225P-201ENST00000516336 KCNA4P22459 653 aa14.1□□□□□ -0.15
RNU6-1225P-201ENST00000516336 PPP4R3CPQ6ZMV5 832 aa14.07□□□□□ -0.16
RNU6-1225P-201ENST00000516336 MSH5O43196 834 aa14.02□□□□□ -0.17
RNU6-1225P-201ENST00000516336 NCBP3Q53F19 620 aaKnown RBP13.78□□□□□ -0.2
RNU6-1225P-201ENST00000516336 SCAF1Q9H7N4 1312 aaKnown RBP13.72□□□□□ -0.21
RNU6-1225P-201ENST00000516336 CNKSR2Q8WXI2 1034 aa13.6□□□□□ -0.23
RNU6-1225P-201ENST00000516336 NPM3O75607 178 aaKnown RBP13.59□□□□□ -0.23
RNU6-1225P-201ENST00000516336 MAPK8IP2Q13387 824 aaPredicted RBP13.54□□□□□ -0.24
RNU6-1225P-201ENST00000516336 SLC4A1APQ9BWU0 796 aaKnown RBP13.48□□□□□ -0.25
RNU6-1225P-201ENST00000516336 EHMT2Q96KQ7 1210 aa13.47□□□□□ -0.25
RNU6-1225P-201ENST00000516336 DMRT2Q9Y5R5 561 aa13.28□□□□□ -0.28
RNU6-1225P-201ENST00000516336 RNF216Q9NWF9 866 aaPredicted RBP13.26□□□□□ -0.29
RNU6-1225P-201ENST00000516336 CSRNP3Q8WYN3 585 aa13.15□□□□□ -0.3
RNU6-1225P-201ENST00000516336 HOXD11P31277 338 aaPredicted RBP13.12□□□□□ -0.31
RNU6-1225P-201ENST00000516336 DNAJC5BQ9UF47 199 aa13.12□□□□□ -0.31
RNU6-1225P-201ENST00000516336 ZBTB22O15209 634 aa12.98□□□□□ -0.33
RNU6-1225P-201ENST00000516336 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
RNU6-1225P-201ENST00000516336 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
RNU6-1225P-201ENST00000516336 DCAF8L1A6NGE4 600 aa12.71□□□□□ -0.37
RNU6-1225P-201ENST00000516336 MYCNP04198 464 aaPredicted RBP12.55□□□□□ -0.4
RNU6-1225P-201ENST00000516336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.52□□□□□ -0.41
RNU6-1225P-201ENST00000516336 ATXN8OSP0DMR3 200 aa12.38□□□□□ -0.43
RNU6-1225P-201ENST00000516336 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
RNU6-1225P-201ENST00000516336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.28□□□□□ -0.44
RNU6-1225P-201ENST00000516336 HNRNPUL2Q1KMD3 747 aaKnown RBP12.28□□□□□ -0.44
RNU6-1225P-201ENST00000516336 SAMD1Q6SPF0 538 aaPredicted RBP12.26□□□□□ -0.45
RNU6-1225P-201ENST00000516336 POTEDQ86YR6 584 aa12.24□□□□□ -0.45
RNU6-1225P-201ENST00000516336 ATF5Q9Y2D1 282 aaPredicted RBP12.2□□□□□ -0.46
RNU6-1225P-201ENST00000516336 APLP2Q06481 763 aa12.07□□□□□ -0.48
RNU6-1225P-201ENST00000516336 RNF39Q9H2S5 420 aa12.05□□□□□ -0.48
RNU6-1225P-201ENST00000516336 ZNF219Q9P2Y4 722 aaPredicted RBP11.97□□□□□ -0.49
RNU6-1225P-201ENST00000516336 C1QBPQ07021 282 aaKnown RBP11.92□□□□□ -0.5
RNU6-1225P-201ENST00000516336 SPINK5Q9NQ38 1064 aaPredicted RBP11.92□□□□□ -0.5
RNU6-1225P-201ENST00000516336 TRHP20396 242 aaPredicted RBP11.88□□□□□ -0.51
RNU6-1225P-201ENST00000516336 FKBP8Q14318 412 aa11.88□□□□□ -0.51
RNU6-1225P-201ENST00000516336 CAPN15O75808 1086 aa11.85□□□□□ -0.51
RNU6-1225P-201ENST00000516336 POLA2Q14181 598 aa11.75□□□□□ -0.53
RNU6-1225P-201ENST00000516336 MKRN4PQ13434 485 aaPredicted RBP11.68□□□□□ -0.54
RNU6-1225P-201ENST00000516336 ABCB7O75027 752 aa11.66□□□□□ -0.54
RNU6-1225P-201ENST00000516336 FBLN2P98095 1184 aa11.66□□□□□ -0.54
RNU6-1225P-201ENST00000516336 SPDYE4A6NLX3 237 aa11.57□□□□□ -0.56
RNU6-1225P-201ENST00000516336 DSG3P32926 999 aa11.57□□□□□ -0.56
RNU6-1225P-201ENST00000516336 ZBTB12Q9Y330 459 aaPredicted RBP11.56□□□□□ -0.56
RNU6-1225P-201ENST00000516336 CACNB1Q02641 598 aaPredicted RBP11.52□□□□□ -0.57
RNU6-1225P-201ENST00000516336 PROM2Q8N271 834 aa11.41□□□□□ -0.58
RNU6-1225P-201ENST00000516336 AMER1Q5JTC6 1135 aaPredicted RBP11.35□□□□□ -0.59
RNU6-1225P-201ENST00000516336 OSCARQ8IYS5 282 aa11.35□□□□□ -0.59
RNU6-1225P-201ENST00000516336 RTN4Q9NQC3 1192 aaKnown RBP11.35□□□□□ -0.59
RNU6-1225P-201ENST00000516336 FBXO3Q9UK99 471 aa11.35□□□□□ -0.59
RNU6-1225P-201ENST00000516336 ZNF692Q9BU19 519 aaPredicted RBP11.29□□□□□ -0.6
RNU6-1225P-201ENST00000516336 SPDYE2BA6NHP3 402 aa11.28□□□□□ -0.6
RNU6-1225P-201ENST00000516336 SPDYE6P0CI01 402 aa11.28□□□□□ -0.6
RNU6-1225P-201ENST00000516336 SPDYE2Q495Y8 402 aa11.28□□□□□ -0.6
RNU6-1225P-201ENST00000516336 SSUH2Q9Y2M2 353 aa11.23□□□□□ -0.61
RNU6-1225P-201ENST00000516336 VASPP50552 380 aaPredicted RBP11.21□□□□□ -0.61
RNU6-1225P-201ENST00000516336 PABPN1Q86U42 306 aaKnown RBP eCLIP11.16□□□□□ -0.62
RNU6-1225P-201ENST00000516336 IFNLR1Q8IU57 520 aaPredicted RBP11.07□□□□□ -0.64
RNU6-1225P-201ENST00000516336 STAG3Q9UJ98 1225 aa11.06□□□□□ -0.64
RNU6-1225P-201ENST00000516336 RBM42Q9BTD8 480 aaKnown RBP11.02□□□□□ -0.65
RNU6-1225P-201ENST00000516336 PLCD3Q8N3E9 789 aa10.96□□□□□ -0.65
RNU6-1225P-201ENST00000516336 AKT1S1Q96B36 256 aa10.95□□□□□ -0.66
RNU6-1225P-201ENST00000516336 MIER1Q8N108 512 aa10.94□□□□□ -0.66
RNU6-1225P-201ENST00000516336 KLHL34Q8N239 644 aa10.94□□□□□ -0.66
RNU6-1225P-201ENST00000516336 SPOCK2Q92563 424 aa10.89□□□□□ -0.67
RNU6-1225P-201ENST00000516336 SPDYE1Q8NFV5 336 aaPredicted RBP10.88□□□□□ -0.67
RNU6-1225P-201ENST00000516336 PLEKHG5O94827 1062 aa10.85□□□□□ -0.67
RNU6-1225P-201ENST00000516336 REM2Q8IYK8 340 aaPredicted RBP10.85□□□□□ -0.67
RNU6-1225P-201ENST00000516336 CLEC11AQ9Y240 323 aa10.83□□□□□ -0.68
RNU6-1225P-201ENST00000516336 PKD2Q13563 968 aa10.82□□□□□ -0.68
RNU6-1225P-201ENST00000516336 ZBTB47Q9UFB7 747 aaPredicted RBP10.79□□□□□ -0.68
RNU6-1225P-201ENST00000516336 PRR29P0C7W0 189 aa10.76□□□□□ -0.69
RNU6-1225P-201ENST00000516336 SLC24A1O60721 1099 aa10.75□□□□□ -0.69
RNU6-1225P-201ENST00000516336 PITPNM1O00562 1244 aa10.72□□□□□ -0.69
RNU6-1225P-201ENST00000516336 DCAF8L2P0C7V8 631 aa10.71□□□□□ -0.69
RNU6-1225P-201ENST00000516336 ECM2O94769 699 aaPredicted RBP10.7□□□□□ -0.7
RNU6-1225P-201ENST00000516336 CREBZFQ9NS37 354 aa10.7□□□□□ -0.7
RNU6-1225P-201ENST00000516336 CIZ1Q9ULV3 898 aaPredicted RBP10.68□□□□□ -0.7
RNU6-1225P-201ENST00000516336 MNX1P50219 401 aaPredicted RBP10.62□□□□□ -0.71
RNU6-1225P-201ENST00000516336 NUBP1P53384 320 aa10.62□□□□□ -0.71
RNU6-1225P-201ENST00000516336 RGL2O15211 777 aa10.59□□□□□ -0.71
RNU6-1225P-201ENST00000516336 GSE1Q14687 1217 aa10.58□□□□□ -0.72
RNU6-1225P-201ENST00000516336 TRIM41Q8WV44 630 aa10.56□□□□□ -0.72
RNU6-1225P-201ENST00000516336 DCAF8Q5TAQ9 597 aa10.55□□□□□ -0.72
RNU6-1225P-201ENST00000516336 CHADLQ6NUI6 762 aa10.54□□□□□ -0.72
RNU6-1225P-201ENST00000516336 FAM212AQ96EL1 285 aa10.53□□□□□ -0.72
RNU6-1225P-201ENST00000516336 NPM1P06748 294 aaKnown RBP eCLIP10.52□□□□□ -0.73
RNU6-1225P-201ENST00000516336 PLCB2Q00722 1185 aa10.51□□□□□ -0.73
RNU6-1225P-201ENST00000516336 RASEFQ8IZ41 740 aa10.51□□□□□ -0.73
RNU6-1225P-201ENST00000516336 PRKAR2AP13861 404 aaKnown RBP10.46□□□□□ -0.73
RNU6-1225P-201ENST00000516336 FXR2P51116 673 aaKnown RBP eCLIP10.46□□□□□ -0.73
RNU6-1225P-201ENST00000516336 FARP1Q9Y4F1 1045 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms