RNA–Protein interactions for RNA: ENST00000438454.1

AL139237.2-201, humanhuman

TSL 3 BASIC

Gene AL139237.2, Length 493 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139237.2-201ENST00000438454 AEBP2Q6ZN18 517 aaPredicted RBP23.57■■□□□ 1.36
AL139237.2-201ENST00000438454 CHIC1Q5VXU3 224 aa22.95■■□□□ 1.26
AL139237.2-201ENST00000438454 PHF23Q9BUL5 403 aaPredicted RBP20.2■□□□□ 0.82
AL139237.2-201ENST00000438454 SENP3Q9H4L4 574 aaPredicted RBP19.99■□□□□ 0.79
AL139237.2-201ENST00000438454 PLPPR3Q6T4P5 718 aa18.6■□□□□ 0.57
AL139237.2-201ENST00000438454 FOXD1Q16676 465 aa18.57■□□□□ 0.56
AL139237.2-201ENST00000438454 PPP6R1Q9UPN7 881 aa17.85■□□□□ 0.45
AL139237.2-201ENST00000438454 ADRA2BP18089 450 aa17.81■□□□□ 0.44
AL139237.2-201ENST00000438454 PIAS4Q8N2W9 510 aaPredicted RBP17.47■□□□□ 0.39
AL139237.2-201ENST00000438454 MSH5O43196 834 aa17.14■□□□□ 0.33
AL139237.2-201ENST00000438454 PPP4R3CPQ6ZMV5 832 aa16.39■□□□□ 0.21
AL139237.2-201ENST00000438454 SCAF1Q9H7N4 1312 aaKnown RBP16.29■□□□□ 0.2
AL139237.2-201ENST00000438454 MAPK8IP2Q13387 824 aaPredicted RBP16.19■□□□□ 0.18
AL139237.2-201ENST00000438454 DMRT2Q9Y5R5 561 aa15.96■□□□□ 0.15
AL139237.2-201ENST00000438454 CNKSR2Q8WXI2 1034 aa15.95■□□□□ 0.14
AL139237.2-201ENST00000438454 KCNA4P22459 653 aa15.94■□□□□ 0.14
AL139237.2-201ENST00000438454 NCBP3Q53F19 620 aaKnown RBP15.94■□□□□ 0.14
AL139237.2-201ENST00000438454 POTEDQ86YR6 584 aa15.72■□□□□ 0.11
AL139237.2-201ENST00000438454 NPM3O75607 178 aaKnown RBP15.71■□□□□ 0.11
AL139237.2-201ENST00000438454 RNF216Q9NWF9 866 aaPredicted RBP15.65■□□□□ 0.1
AL139237.2-201ENST00000438454 HOXD11P31277 338 aaPredicted RBP15.61■□□□□ 0.09
AL139237.2-201ENST00000438454 DNAJC5BQ9UF47 199 aa15.3■□□□□ 0.04
AL139237.2-201ENST00000438454 DCAF8L1A6NGE4 600 aa15.23■□□□□ 0.03
AL139237.2-201ENST00000438454 SLC4A1APQ9BWU0 796 aaKnown RBP15.16■□□□□ 0.02
AL139237.2-201ENST00000438454 SLC4A2P04920 1241 aa14.86□□□□□ -0.03
AL139237.2-201ENST00000438454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.86□□□□□ -0.03
AL139237.2-201ENST00000438454 RNF39Q9H2S5 420 aa14.7□□□□□ -0.06
AL139237.2-201ENST00000438454 FOXD4L1Q9NU39 408 aa14.68□□□□□ -0.06
AL139237.2-201ENST00000438454 ZBTB22O15209 634 aa14.67□□□□□ -0.06
AL139237.2-201ENST00000438454 EHMT2Q96KQ7 1210 aa14.63□□□□□ -0.07
AL139237.2-201ENST00000438454 U3KPZ7 1027 aaPredicted RBP14.61□□□□□ -0.07
AL139237.2-201ENST00000438454 CSRNP3Q8WYN3 585 aa14.54□□□□□ -0.08
AL139237.2-201ENST00000438454 C1QBPQ07021 282 aaKnown RBP14.52□□□□□ -0.09
AL139237.2-201ENST00000438454 MYCNP04198 464 aaPredicted RBP14.5□□□□□ -0.09
AL139237.2-201ENST00000438454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.41□□□□□ -0.1
AL139237.2-201ENST00000438454 HNRNPUL2Q1KMD3 747 aaKnown RBP14.41□□□□□ -0.1
AL139237.2-201ENST00000438454 SAMD1Q6SPF0 538 aaPredicted RBP14.35□□□□□ -0.11
AL139237.2-201ENST00000438454 CACNB1Q02641 598 aaPredicted RBP14.34□□□□□ -0.11
AL139237.2-201ENST00000438454 APLP2Q06481 763 aa14.26□□□□□ -0.13
AL139237.2-201ENST00000438454 SPINK5Q9NQ38 1064 aaPredicted RBP14.23□□□□□ -0.13
AL139237.2-201ENST00000438454 ATXN8OSP0DMR3 200 aa14.2□□□□□ -0.14
AL139237.2-201ENST00000438454 CAPN15O75808 1086 aa14.16□□□□□ -0.14
AL139237.2-201ENST00000438454 ATF5Q9Y2D1 282 aaPredicted RBP14.14□□□□□ -0.15
AL139237.2-201ENST00000438454 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
AL139237.2-201ENST00000438454 ZNF219Q9P2Y4 722 aaPredicted RBP14.08□□□□□ -0.16
AL139237.2-201ENST00000438454 DSG3P32926 999 aa13.96□□□□□ -0.17
AL139237.2-201ENST00000438454 ABCB7O75027 752 aa13.88□□□□□ -0.19
AL139237.2-201ENST00000438454 POLA2Q14181 598 aa13.86□□□□□ -0.19
AL139237.2-201ENST00000438454 ZBTB12Q9Y330 459 aaPredicted RBP13.61□□□□□ -0.23
AL139237.2-201ENST00000438454 FBLN2P98095 1184 aa13.53□□□□□ -0.24
AL139237.2-201ENST00000438454 MKRN4PQ13434 485 aaPredicted RBP13.52□□□□□ -0.25
AL139237.2-201ENST00000438454 OSCARQ8IYS5 282 aa13.36□□□□□ -0.27
AL139237.2-201ENST00000438454 RBM42Q9BTD8 480 aaKnown RBP13.28□□□□□ -0.28
AL139237.2-201ENST00000438454 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
AL139237.2-201ENST00000438454 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
AL139237.2-201ENST00000438454 SPDYE2Q495Y8 402 aa13.25□□□□□ -0.29
AL139237.2-201ENST00000438454 ZNF692Q9BU19 519 aaPredicted RBP13.19□□□□□ -0.3
AL139237.2-201ENST00000438454 SPDYE4A6NLX3 237 aa13.18□□□□□ -0.3
AL139237.2-201ENST00000438454 SSUH2Q9Y2M2 353 aa13.14□□□□□ -0.31
AL139237.2-201ENST00000438454 AKT1S1Q96B36 256 aa13.13□□□□□ -0.31
AL139237.2-201ENST00000438454 FKBP8Q14318 412 aa13.12□□□□□ -0.31
AL139237.2-201ENST00000438454 PABPN1Q86U42 306 aaKnown RBP eCLIP13.01□□□□□ -0.33
AL139237.2-201ENST00000438454 REM2Q8IYK8 340 aaPredicted RBP13.01□□□□□ -0.33
AL139237.2-201ENST00000438454 PROM2Q8N271 834 aa12.98□□□□□ -0.33
AL139237.2-201ENST00000438454 SPDYE1Q8NFV5 336 aaPredicted RBP12.87□□□□□ -0.35
AL139237.2-201ENST00000438454 PITPNM1O00562 1244 aa12.84□□□□□ -0.35
AL139237.2-201ENST00000438454 CLEC11AQ9Y240 323 aa12.79□□□□□ -0.36
AL139237.2-201ENST00000438454 STAG3Q9UJ98 1225 aa12.78□□□□□ -0.36
AL139237.2-201ENST00000438454 CHRDL2Q6WN34 429 aa12.77□□□□□ -0.37
AL139237.2-201ENST00000438454 PRR29P0C7W0 189 aa12.69□□□□□ -0.38
AL139237.2-201ENST00000438454 FBXO3Q9UK99 471 aa12.68□□□□□ -0.38
AL139237.2-201ENST00000438454 FXR2P51116 673 aaKnown RBP eCLIP12.63□□□□□ -0.39
AL139237.2-201ENST00000438454 PIP4P2Q8N4L2 257 aa12.6□□□□□ -0.39
AL139237.2-201ENST00000438454 CREBZFQ9NS37 354 aa12.53□□□□□ -0.4
AL139237.2-201ENST00000438454 PRKAR2AP13861 404 aaKnown RBP12.51□□□□□ -0.41
AL139237.2-201ENST00000438454 MIER1Q8N108 512 aa12.51□□□□□ -0.41
AL139237.2-201ENST00000438454 VASPP50552 380 aaPredicted RBP12.5□□□□□ -0.41
AL139237.2-201ENST00000438454 CHADLQ6NUI6 762 aa12.49□□□□□ -0.41
AL139237.2-201ENST00000438454 PLCD3Q8N3E9 789 aa12.46□□□□□ -0.41
AL139237.2-201ENST00000438454 POTEHQ6S545 545 aa12.44□□□□□ -0.42
AL139237.2-201ENST00000438454 PLEKHG5O94827 1062 aa12.43□□□□□ -0.42
AL139237.2-201ENST00000438454 MNX1P50219 401 aaPredicted RBP12.4□□□□□ -0.42
AL139237.2-201ENST00000438454 FARP1Q9Y4F1 1045 aaPredicted RBP12.39□□□□□ -0.43
AL139237.2-201ENST00000438454 IFNLR1Q8IU57 520 aaPredicted RBP12.35□□□□□ -0.43
AL139237.2-201ENST00000438454 ZBTB47Q9UFB7 747 aaPredicted RBP12.33□□□□□ -0.44
AL139237.2-201ENST00000438454 NPM1P06748 294 aaKnown RBP eCLIP12.31□□□□□ -0.44
AL139237.2-201ENST00000438454 KLHL34Q8N239 644 aa12.3□□□□□ -0.44
AL139237.2-201ENST00000438454 NUBP1P53384 320 aa12.21□□□□□ -0.45
AL139237.2-201ENST00000438454 SPOCK2Q92563 424 aa12.21□□□□□ -0.45
AL139237.2-201ENST00000438454 C19orf67A6NJJ6 358 aa12.2□□□□□ -0.46
AL139237.2-201ENST00000438454 HAX1O00165 279 aa12.2□□□□□ -0.46
AL139237.2-201ENST00000438454 RASEFQ8IZ41 740 aa12.16□□□□□ -0.46
AL139237.2-201ENST00000438454 CD44P16070 742 aaKnown RBP12.15□□□□□ -0.46
AL139237.2-201ENST00000438454 EVX2Q03828 476 aa12.12□□□□□ -0.47
AL139237.2-201ENST00000438454 TSPYL2Q9H2G4 693 aaPredicted RBP12.1□□□□□ -0.47
AL139237.2-201ENST00000438454 PAK3O75914 559 aaPredicted RBP12.09□□□□□ -0.47
AL139237.2-201ENST00000438454 FAM212AQ96EL1 285 aa12.08□□□□□ -0.48
AL139237.2-201ENST00000438454 ZRANB1Q9UGI0 708 aa12.08□□□□□ -0.48
AL139237.2-201ENST00000438454 DCAF8Q5TAQ9 597 aa12.07□□□□□ -0.48
AL139237.2-201ENST00000438454 GSE1Q14687 1217 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms