RNA–Protein interactions for RNA: ENST00000376094.8

TUBD1-204, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-204ENST00000376094 AEBP2Q6ZN18 517 aaPredicted RBP22.24■■□□□ 1.15
TUBD1-204ENST00000376094 CHIC1Q5VXU3 224 aa21.75■■□□□ 1.07
TUBD1-204ENST00000376094 PHF23Q9BUL5 403 aaPredicted RBP19.07■□□□□ 0.64
TUBD1-204ENST00000376094 SENP3Q9H4L4 574 aaPredicted RBP18.97■□□□□ 0.63
TUBD1-204ENST00000376094 POTEDQ86YR6 584 aa17.94■□□□□ 0.46
TUBD1-204ENST00000376094 PLPPR3Q6T4P5 718 aa17.68■□□□□ 0.42
TUBD1-204ENST00000376094 FOXD1Q16676 465 aa17.54■□□□□ 0.4
TUBD1-204ENST00000376094 ADRA2BP18089 450 aa16.85■□□□□ 0.29
TUBD1-204ENST00000376094 PPP6R1Q9UPN7 881 aa16.83■□□□□ 0.28
TUBD1-204ENST00000376094 MSH5O43196 834 aa16.7■□□□□ 0.26
TUBD1-204ENST00000376094 PIAS4Q8N2W9 510 aaPredicted RBP16.58■□□□□ 0.24
TUBD1-204ENST00000376094 PPP4R3CPQ6ZMV5 832 aa15.55■□□□□ 0.08
TUBD1-204ENST00000376094 SCAF1Q9H7N4 1312 aaKnown RBP15.5■□□□□ 0.07
TUBD1-204ENST00000376094 MAPK8IP2Q13387 824 aaPredicted RBP15.27■□□□□ 0.04
TUBD1-204ENST00000376094 NCBP3Q53F19 620 aaKnown RBP15.21■□□□□ 0.03
TUBD1-204ENST00000376094 KCNA4P22459 653 aa15.14■□□□□ 0.01
TUBD1-204ENST00000376094 CNKSR2Q8WXI2 1034 aa15.14■□□□□ 0.01
TUBD1-204ENST00000376094 DMRT2Q9Y5R5 561 aa15.11■□□□□ 0.01
TUBD1-204ENST00000376094 NPM3O75607 178 aaKnown RBP14.9□□□□□ -0.02
TUBD1-204ENST00000376094 CACNB1Q02641 598 aaPredicted RBP14.87□□□□□ -0.03
TUBD1-204ENST00000376094 RNF216Q9NWF9 866 aaPredicted RBP14.85□□□□□ -0.03
TUBD1-204ENST00000376094 HOXD11P31277 338 aaPredicted RBP14.78□□□□□ -0.04
TUBD1-204ENST00000376094 DCAF8L1A6NGE4 600 aa14.49□□□□□ -0.09
TUBD1-204ENST00000376094 DNAJC5BQ9UF47 199 aa14.49□□□□□ -0.09
TUBD1-204ENST00000376094 SLC4A1APQ9BWU0 796 aaKnown RBP14.46□□□□□ -0.09
TUBD1-204ENST00000376094 RNF39Q9H2S5 420 aa14.17□□□□□ -0.14
TUBD1-204ENST00000376094 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.12□□□□□ -0.15
TUBD1-204ENST00000376094 SLC4A2P04920 1241 aa14.06□□□□□ -0.16
TUBD1-204ENST00000376094 EHMT2Q96KQ7 1210 aa13.99□□□□□ -0.17
TUBD1-204ENST00000376094 FOXD4L1Q9NU39 408 aa13.98□□□□□ -0.17
TUBD1-204ENST00000376094 C1QBPQ07021 282 aaKnown RBP13.9□□□□□ -0.18
TUBD1-204ENST00000376094 ZBTB22O15209 634 aa13.89□□□□□ -0.19
TUBD1-204ENST00000376094 POTEHQ6S545 545 aa13.86□□□□□ -0.19
TUBD1-204ENST00000376094 U3KPZ7 1027 aaPredicted RBP13.84□□□□□ -0.19
TUBD1-204ENST00000376094 MYCNP04198 464 aaPredicted RBP13.82□□□□□ -0.2
TUBD1-204ENST00000376094 CSRNP3Q8WYN3 585 aa13.82□□□□□ -0.2
TUBD1-204ENST00000376094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.75□□□□□ -0.21
TUBD1-204ENST00000376094 HNRNPUL2Q1KMD3 747 aaKnown RBP13.75□□□□□ -0.21
TUBD1-204ENST00000376094 SAMD1Q6SPF0 538 aaPredicted RBP13.68□□□□□ -0.22
TUBD1-204ENST00000376094 APLP2Q06481 763 aa13.64□□□□□ -0.23
TUBD1-204ENST00000376094 ATXN8OSP0DMR3 200 aa13.51□□□□□ -0.25
TUBD1-204ENST00000376094 CAPN15O75808 1086 aa13.46□□□□□ -0.25
TUBD1-204ENST00000376094 SPINK5Q9NQ38 1064 aaPredicted RBP13.45□□□□□ -0.26
TUBD1-204ENST00000376094 ZNF219Q9P2Y4 722 aaPredicted RBP13.4□□□□□ -0.26
TUBD1-204ENST00000376094 TRHP20396 242 aaPredicted RBP13.38□□□□□ -0.27
TUBD1-204ENST00000376094 ATF5Q9Y2D1 282 aaPredicted RBP13.36□□□□□ -0.27
TUBD1-204ENST00000376094 DSG3P32926 999 aa13.2□□□□□ -0.3
TUBD1-204ENST00000376094 ABCB7O75027 752 aa13.16□□□□□ -0.3
TUBD1-204ENST00000376094 POLA2Q14181 598 aa13.14□□□□□ -0.31
TUBD1-204ENST00000376094 ZBTB12Q9Y330 459 aaPredicted RBP12.99□□□□□ -0.33
TUBD1-204ENST00000376094 FBLN2P98095 1184 aa12.92□□□□□ -0.34
TUBD1-204ENST00000376094 MKRN4PQ13434 485 aaPredicted RBP12.8□□□□□ -0.36
TUBD1-204ENST00000376094 OSCARQ8IYS5 282 aa12.69□□□□□ -0.38
TUBD1-204ENST00000376094 RBM42Q9BTD8 480 aaKnown RBP12.65□□□□□ -0.38
TUBD1-204ENST00000376094 SPDYE2BA6NHP3 402 aa12.6□□□□□ -0.39
TUBD1-204ENST00000376094 SPDYE6P0CI01 402 aa12.6□□□□□ -0.39
TUBD1-204ENST00000376094 SPDYE2Q495Y8 402 aa12.6□□□□□ -0.39
TUBD1-204ENST00000376094 SPDYE4A6NLX3 237 aa12.56□□□□□ -0.4
TUBD1-204ENST00000376094 ZNF692Q9BU19 519 aaPredicted RBP12.55□□□□□ -0.4
TUBD1-204ENST00000376094 SP7Q8TDD2 431 aaPredicted RBP12.54□□□□□ -0.4
TUBD1-204ENST00000376094 FKBP8Q14318 412 aa12.53□□□□□ -0.4
TUBD1-204ENST00000376094 CHRDL2Q6WN34 429 aa12.47□□□□□ -0.41
TUBD1-204ENST00000376094 SSUH2Q9Y2M2 353 aa12.47□□□□□ -0.41
TUBD1-204ENST00000376094 AKT1S1Q96B36 256 aa12.46□□□□□ -0.41
TUBD1-204ENST00000376094 PABPN1Q86U42 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
TUBD1-204ENST00000376094 REM2Q8IYK8 340 aaPredicted RBP12.32□□□□□ -0.44
TUBD1-204ENST00000376094 PROM2Q8N271 834 aa12.31□□□□□ -0.44
TUBD1-204ENST00000376094 SPDYE1Q8NFV5 336 aaPredicted RBP12.26□□□□□ -0.45
TUBD1-204ENST00000376094 STAG3Q9UJ98 1225 aa12.21□□□□□ -0.45
TUBD1-204ENST00000376094 CLEC11AQ9Y240 323 aa12.18□□□□□ -0.46
TUBD1-204ENST00000376094 PITPNM1O00562 1244 aa12.17□□□□□ -0.46
TUBD1-204ENST00000376094 FBXO3Q9UK99 471 aa12.15□□□□□ -0.46
TUBD1-204ENST00000376094 PRR29P0C7W0 189 aa12.07□□□□□ -0.48
TUBD1-204ENST00000376094 HAX1O00165 279 aa11.96□□□□□ -0.49
TUBD1-204ENST00000376094 PIP4P2Q8N4L2 257 aa11.96□□□□□ -0.49
TUBD1-204ENST00000376094 VASPP50552 380 aaPredicted RBP11.94□□□□□ -0.5
TUBD1-204ENST00000376094 FXR2P51116 673 aaKnown RBP eCLIP11.94□□□□□ -0.5
TUBD1-204ENST00000376094 PLEKHG5O94827 1062 aa11.93□□□□□ -0.5
TUBD1-204ENST00000376094 MIER1Q8N108 512 aa11.92□□□□□ -0.5
TUBD1-204ENST00000376094 PLCD3Q8N3E9 789 aa11.92□□□□□ -0.5
TUBD1-204ENST00000376094 PRKAR2AP13861 404 aaKnown RBP11.88□□□□□ -0.51
TUBD1-204ENST00000376094 CREBZFQ9NS37 354 aa11.87□□□□□ -0.51
TUBD1-204ENST00000376094 CHADLQ6NUI6 762 aa11.84□□□□□ -0.51
TUBD1-204ENST00000376094 ZBTB47Q9UFB7 747 aaPredicted RBP11.82□□□□□ -0.52
TUBD1-204ENST00000376094 EVX2Q03828 476 aa11.78□□□□□ -0.52
TUBD1-204ENST00000376094 KLHL34Q8N239 644 aa11.78□□□□□ -0.52
TUBD1-204ENST00000376094 FARP1Q9Y4F1 1045 aaPredicted RBP11.76□□□□□ -0.53
TUBD1-204ENST00000376094 NPM1P06748 294 aaKnown RBP eCLIP11.75□□□□□ -0.53
TUBD1-204ENST00000376094 PLSCR2Q9NRY7 297 aa11.75□□□□□ -0.53
TUBD1-204ENST00000376094 IFNLR1Q8IU57 520 aaPredicted RBP11.74□□□□□ -0.53
TUBD1-204ENST00000376094 LHX8Q68G74 356 aa11.73□□□□□ -0.53
TUBD1-204ENST00000376094 MNX1P50219 401 aaPredicted RBP11.72□□□□□ -0.53
TUBD1-204ENST00000376094 SPOCK2Q92563 424 aa11.66□□□□□ -0.54
TUBD1-204ENST00000376094 NUBP1P53384 320 aa11.59□□□□□ -0.55
TUBD1-204ENST00000376094 PAK3O75914 559 aaPredicted RBP11.57□□□□□ -0.56
TUBD1-204ENST00000376094 FAM212AQ96EL1 285 aa11.55□□□□□ -0.56
TUBD1-204ENST00000376094 C19orf67A6NJJ6 358 aa11.54□□□□□ -0.56
TUBD1-204ENST00000376094 CD44P16070 742 aaKnown RBP11.54□□□□□ -0.56
TUBD1-204ENST00000376094 RASEFQ8IZ41 740 aa11.53□□□□□ -0.56
TUBD1-204ENST00000376094 GSE1Q14687 1217 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms