RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 AEBP2Q6ZN18 517 aaPredicted RBP24.26■■□□□ 1.47
RNU6-553P-201ENST00000364047 CHIC1Q5VXU3 224 aa23.57■■□□□ 1.36
RNU6-553P-201ENST00000364047 PHF23Q9BUL5 403 aaPredicted RBP20.7■□□□□ 0.9
RNU6-553P-201ENST00000364047 SENP3Q9H4L4 574 aaPredicted RBP20.64■□□□□ 0.89
RNU6-553P-201ENST00000364047 FOXD1Q16676 465 aa19.16■□□□□ 0.66
RNU6-553P-201ENST00000364047 PLPPR3Q6T4P5 718 aa19.09■□□□□ 0.65
RNU6-553P-201ENST00000364047 PPP6R1Q9UPN7 881 aa18.31■□□□□ 0.52
RNU6-553P-201ENST00000364047 ADRA2BP18089 450 aa18.3■□□□□ 0.52
RNU6-553P-201ENST00000364047 PIAS4Q8N2W9 510 aaPredicted RBP18.05■□□□□ 0.48
RNU6-553P-201ENST00000364047 MSH5O43196 834 aa17.74■□□□□ 0.43
RNU6-553P-201ENST00000364047 PPP4R3CPQ6ZMV5 832 aa16.8■□□□□ 0.28
RNU6-553P-201ENST00000364047 SCAF1Q9H7N4 1312 aaKnown RBP16.75■□□□□ 0.27
RNU6-553P-201ENST00000364047 MAPK8IP2Q13387 824 aaPredicted RBP16.65■□□□□ 0.26
RNU6-553P-201ENST00000364047 DMRT2Q9Y5R5 561 aa16.44■□□□□ 0.22
RNU6-553P-201ENST00000364047 POTEDQ86YR6 584 aa16.4■□□□□ 0.22
RNU6-553P-201ENST00000364047 CNKSR2Q8WXI2 1034 aa16.35■□□□□ 0.21
RNU6-553P-201ENST00000364047 NCBP3Q53F19 620 aaKnown RBP16.33■□□□□ 0.2
RNU6-553P-201ENST00000364047 KCNA4P22459 653 aa16.25■□□□□ 0.19
RNU6-553P-201ENST00000364047 NPM3O75607 178 aaKnown RBP16.08■□□□□ 0.16
RNU6-553P-201ENST00000364047 RNF216Q9NWF9 866 aaPredicted RBP16.07■□□□□ 0.16
RNU6-553P-201ENST00000364047 HOXD11P31277 338 aaPredicted RBP16.03■□□□□ 0.16
RNU6-553P-201ENST00000364047 DCAF8L1A6NGE4 600 aa15.79■□□□□ 0.12
RNU6-553P-201ENST00000364047 DNAJC5BQ9UF47 199 aa15.59■□□□□ 0.09
RNU6-553P-201ENST00000364047 SLC4A1APQ9BWU0 796 aaKnown RBP15.46■□□□□ 0.07
RNU6-553P-201ENST00000364047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.32■□□□□ 0.04
RNU6-553P-201ENST00000364047 SLC4A2P04920 1241 aa15.21■□□□□ 0.03
RNU6-553P-201ENST00000364047 RNF39Q9H2S5 420 aa15.17■□□□□ 0.02
RNU6-553P-201ENST00000364047 U3KPZ7 1027 aaPredicted RBP15.04■□□□□ -0
RNU6-553P-201ENST00000364047 FOXD4L1Q9NU39 408 aa15□□□□□ -0.01
RNU6-553P-201ENST00000364047 C1QBPQ07021 282 aaKnown RBP14.99□□□□□ -0.01
RNU6-553P-201ENST00000364047 ZBTB22O15209 634 aa14.94□□□□□ -0.02
RNU6-553P-201ENST00000364047 CACNB1Q02641 598 aaPredicted RBP14.91□□□□□ -0.02
RNU6-553P-201ENST00000364047 EHMT2Q96KQ7 1210 aa14.89□□□□□ -0.03
RNU6-553P-201ENST00000364047 MYCNP04198 464 aaPredicted RBP14.86□□□□□ -0.03
RNU6-553P-201ENST00000364047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.81□□□□□ -0.04
RNU6-553P-201ENST00000364047 HNRNPUL2Q1KMD3 747 aaKnown RBP14.81□□□□□ -0.04
RNU6-553P-201ENST00000364047 SAMD1Q6SPF0 538 aaPredicted RBP14.75□□□□□ -0.05
RNU6-553P-201ENST00000364047 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
RNU6-553P-201ENST00000364047 APLP2Q06481 763 aa14.69□□□□□ -0.06
RNU6-553P-201ENST00000364047 SPINK5Q9NQ38 1064 aaPredicted RBP14.66□□□□□ -0.06
RNU6-553P-201ENST00000364047 CAPN15O75808 1086 aa14.64□□□□□ -0.07
RNU6-553P-201ENST00000364047 TRHP20396 242 aaPredicted RBP14.53□□□□□ -0.08
RNU6-553P-201ENST00000364047 ZNF219Q9P2Y4 722 aaPredicted RBP14.51□□□□□ -0.09
RNU6-553P-201ENST00000364047 ATXN8OSP0DMR3 200 aa14.47□□□□□ -0.09
RNU6-553P-201ENST00000364047 ATF5Q9Y2D1 282 aaPredicted RBP14.46□□□□□ -0.09
RNU6-553P-201ENST00000364047 DSG3P32926 999 aa14.38□□□□□ -0.11
RNU6-553P-201ENST00000364047 ABCB7O75027 752 aa14.34□□□□□ -0.11
RNU6-553P-201ENST00000364047 POLA2Q14181 598 aa14.24□□□□□ -0.13
RNU6-553P-201ENST00000364047 ZBTB12Q9Y330 459 aaPredicted RBP14.01□□□□□ -0.17
RNU6-553P-201ENST00000364047 FBLN2P98095 1184 aa13.9□□□□□ -0.18
RNU6-553P-201ENST00000364047 MKRN4PQ13434 485 aaPredicted RBP13.84□□□□□ -0.19
RNU6-553P-201ENST00000364047 OSCARQ8IYS5 282 aa13.78□□□□□ -0.2
RNU6-553P-201ENST00000364047 RBM42Q9BTD8 480 aaKnown RBP13.73□□□□□ -0.21
RNU6-553P-201ENST00000364047 SPDYE2BA6NHP3 402 aa13.61□□□□□ -0.23
RNU6-553P-201ENST00000364047 SPDYE6P0CI01 402 aa13.61□□□□□ -0.23
RNU6-553P-201ENST00000364047 SPDYE2Q495Y8 402 aa13.61□□□□□ -0.23
RNU6-553P-201ENST00000364047 ZNF692Q9BU19 519 aaPredicted RBP13.54□□□□□ -0.24
RNU6-553P-201ENST00000364047 AKT1S1Q96B36 256 aa13.52□□□□□ -0.25
RNU6-553P-201ENST00000364047 SPDYE4A6NLX3 237 aa13.47□□□□□ -0.25
RNU6-553P-201ENST00000364047 SSUH2Q9Y2M2 353 aa13.47□□□□□ -0.25
RNU6-553P-201ENST00000364047 REM2Q8IYK8 340 aaPredicted RBP13.39□□□□□ -0.27
RNU6-553P-201ENST00000364047 FKBP8Q14318 412 aa13.36□□□□□ -0.27
RNU6-553P-201ENST00000364047 PABPN1Q86U42 306 aaKnown RBP eCLIP13.36□□□□□ -0.27
RNU6-553P-201ENST00000364047 PITPNM1O00562 1244 aa13.26□□□□□ -0.29
RNU6-553P-201ENST00000364047 SPDYE1Q8NFV5 336 aaPredicted RBP13.25□□□□□ -0.29
RNU6-553P-201ENST00000364047 CHRDL2Q6WN34 429 aa13.22□□□□□ -0.29
RNU6-553P-201ENST00000364047 CLEC11AQ9Y240 323 aa13.21□□□□□ -0.29
RNU6-553P-201ENST00000364047 PROM2Q8N271 834 aa13.2□□□□□ -0.3
RNU6-553P-201ENST00000364047 STAG3Q9UJ98 1225 aa13.1□□□□□ -0.31
RNU6-553P-201ENST00000364047 PRR29P0C7W0 189 aa13.06□□□□□ -0.32
RNU6-553P-201ENST00000364047 PIP4P2Q8N4L2 257 aa13.02□□□□□ -0.33
RNU6-553P-201ENST00000364047 FXR2P51116 673 aaKnown RBP eCLIP13.01□□□□□ -0.33
RNU6-553P-201ENST00000364047 POTEHQ6S545 545 aa12.96□□□□□ -0.33
RNU6-553P-201ENST00000364047 PRKAR2AP13861 404 aaKnown RBP12.92□□□□□ -0.34
RNU6-553P-201ENST00000364047 FBXO3Q9UK99 471 aa12.92□□□□□ -0.34
RNU6-553P-201ENST00000364047 CHADLQ6NUI6 762 aa12.89□□□□□ -0.35
RNU6-553P-201ENST00000364047 CREBZFQ9NS37 354 aa12.84□□□□□ -0.35
RNU6-553P-201ENST00000364047 MIER1Q8N108 512 aa12.8□□□□□ -0.36
RNU6-553P-201ENST00000364047 PLCD3Q8N3E9 789 aa12.78□□□□□ -0.36
RNU6-553P-201ENST00000364047 PLEKHG5O94827 1062 aa12.76□□□□□ -0.37
RNU6-553P-201ENST00000364047 VASPP50552 380 aaPredicted RBP12.75□□□□□ -0.37
RNU6-553P-201ENST00000364047 FARP1Q9Y4F1 1045 aaPredicted RBP12.75□□□□□ -0.37
RNU6-553P-201ENST00000364047 MNX1P50219 401 aaPredicted RBP12.68□□□□□ -0.38
RNU6-553P-201ENST00000364047 HAX1O00165 279 aa12.65□□□□□ -0.38
RNU6-553P-201ENST00000364047 NPM1P06748 294 aaKnown RBP eCLIP12.64□□□□□ -0.39
RNU6-553P-201ENST00000364047 ZBTB47Q9UFB7 747 aaPredicted RBP12.63□□□□□ -0.39
RNU6-553P-201ENST00000364047 C19orf67A6NJJ6 358 aa12.58□□□□□ -0.4
RNU6-553P-201ENST00000364047 KLHL34Q8N239 644 aa12.58□□□□□ -0.4
RNU6-553P-201ENST00000364047 CD44P16070 742 aaKnown RBP12.55□□□□□ -0.4
RNU6-553P-201ENST00000364047 IFNLR1Q8IU57 520 aaPredicted RBP12.54□□□□□ -0.4
RNU6-553P-201ENST00000364047 EVX2Q03828 476 aa12.5□□□□□ -0.41
RNU6-553P-201ENST00000364047 PAK3O75914 559 aaPredicted RBP12.48□□□□□ -0.41
RNU6-553P-201ENST00000364047 NUBP1P53384 320 aa12.46□□□□□ -0.41
RNU6-553P-201ENST00000364047 RASEFQ8IZ41 740 aa12.46□□□□□ -0.41
RNU6-553P-201ENST00000364047 ZRANB1Q9UGI0 708 aa12.46□□□□□ -0.41
RNU6-553P-201ENST00000364047 SPOCK2Q92563 424 aa12.44□□□□□ -0.42
RNU6-553P-201ENST00000364047 TSPYL2Q9H2G4 693 aaPredicted RBP12.44□□□□□ -0.42
RNU6-553P-201ENST00000364047 SP7Q8TDD2 431 aaPredicted RBP12.4□□□□□ -0.42
RNU6-553P-201ENST00000364047 FAM212AQ96EL1 285 aa12.4□□□□□ -0.42
RNU6-553P-201ENST00000364047 ZNF579Q8NAF0 562 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms