Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.73□□□□□ -1.33
CTC1Q2NKJ3 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CTC1Q2NKJ3 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CTC1Q2NKJ3 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.73□□□□□ -1.33
CTC1Q2NKJ3 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CTC1Q2NKJ3 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CTC1Q2NKJ3 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CTC1Q2NKJ3 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.73□□□□□ -1.33
CTC1Q2NKJ3 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
CTC1Q2NKJ3 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CTC1Q2NKJ3 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 AC023245.2-201ENST00000530760 2978 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 AC005225.5-201ENST00000623547 2225 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 RNU6-490P-201ENST00000362985 107 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 RNA5SP346-201ENST00000363541 121 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 SNORD27-201ENST00000363981 72 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 RNU4-48P-201ENST00000365559 182 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 Y_RNA.378-201ENST00000365652 113 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 SNORA75.6-201ENST00000391318 127 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 RNU6-493P-201ENST00000391321 108 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 MED28P3-201ENST00000444288 531 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 AL935212.3-201ENST00000450729 284 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 ACA64.1-201ENST00000459171 127 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 HSPD1P15-201ENST00000505573 1122 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 RNU6-256P-201ENST00000516747 97 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 RNU6-1212P-201ENST00000517023 104 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 HMGB1P23-201ENST00000518743 568 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 AP001922.4-201ENST00000526967 290 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 AP003396.4-201ENST00000527574 265 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 AL137161.1-201ENST00000532231 390 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 SNORD95-201ENST00000579879 68 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 AL512652.1-201ENST00000619006 500 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 AC069234.4-201ENST00000621276 412 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 MIR6719-201ENST00000622428 87 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 AL136984.1-201ENST00000607611 1893 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 AC123769.1-201ENST00000530992 3192 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 AC235565.1-201ENST00000456962 1325 ntBASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CTC1Q2NKJ3 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CTC1Q2NKJ3 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
CTC1Q2NKJ3 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CTC1Q2NKJ3 AC092125.1-201ENST00000562568 1995 ntBASIC6.71□□□□□ -1.33
CTC1Q2NKJ3 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
CTC1Q2NKJ3 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
CTC1Q2NKJ3 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CTC1Q2NKJ3 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 XPOTP1-201ENST00000443317 2398 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 SNORD113-7-201ENST00000363762 77 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 RNU6-190P-201ENST00000384154 102 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 MIR320B1-201ENST00000390209 79 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 MIR1303-201ENST00000408625 86 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 RNU4-25P-201ENST00000410569 230 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 RNA5SP345-201ENST00000410646 108 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 RNU2-14P-201ENST00000411053 191 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 RN7SKP293-201ENST00000411389 296 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 AC078974.1-201ENST00000411597 223 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 RPL21P24-201ENST00000413752 448 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 UBE2FP1-201ENST00000416536 447 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 AC108032.1-201ENST00000416706 207 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 RPS3AP54-201ENST00000435535 734 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 RPS3AP38-201ENST00000435889 763 ntBASIC6.71□□□□□ -1.34
CTC1Q2NKJ3 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms