Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 HMGB1P3-201ENST00000502802 616 ntBASIC1.36□□□□□ -2.19
MACF1Q9UPN3 AC013244.3-201ENST00000605614 388 ntBASIC1.36□□□□□ -2.19
MACF1Q9UPN3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 LINC02471-203ENST00000641941 4752 ntBASIC1.36□□□□□ -2.19
MACF1Q9UPN3 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 AC004520.1-201ENST00000608362 1413 ntBASIC1.36□□□□□ -2.19
MACF1Q9UPN3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 MAPK10-320ENST00000641462 6696 ntBASIC1.36□□□□□ -2.19
MACF1Q9UPN3 RNU6-618P-201ENST00000363518 112 ntBASIC1.36□□□□□ -2.19
MACF1Q9UPN3 NPM1P37-201ENST00000403105 874 ntBASIC1.36□□□□□ -2.19
MACF1Q9UPN3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 TRAV37-201ENST00000553906 342 ntBASIC1.36□□□□□ -2.19
MACF1Q9UPN3 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 OR4G1P-202ENST00000641173 1788 ntBASIC1.36□□□□□ -2.19
MACF1Q9UPN3 RNA5SP68-201ENST00000363885 119 ntBASIC1.36□□□□□ -2.19
MACF1Q9UPN3 SNORA80E-201ENST00000384744 137 ntBASIC1.36□□□□□ -2.19
MACF1Q9UPN3 ATF1P1-201ENST00000406040 927 ntBASIC1.36□□□□□ -2.19
MACF1Q9UPN3 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 AC006480.1-201ENST00000449887 378 ntBASIC1.36□□□□□ -2.19
MACF1Q9UPN3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 RPL23AP37-201ENST00000479658 549 ntBASIC1.36□□□□□ -2.19
MACF1Q9UPN3 AC026412.2-201ENST00000512270 1075 ntBASIC1.36□□□□□ -2.19
MACF1Q9UPN3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 AP002770.2-201ENST00000543613 532 ntBASIC1.36□□□□□ -2.19
MACF1Q9UPN3 AC138761.3-201ENST00000579993 334 ntBASIC1.36□□□□□ -2.19
MACF1Q9UPN3 YWHAEP7-203ENST00000622054 312 ntBASIC1.36□□□□□ -2.19
MACF1Q9UPN3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 HDGFP1-201ENST00000405943 252 ntBASIC1.36□□□□□ -2.19
MACF1Q9UPN3 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 BOLA3P3-201ENST00000505182 232 ntBASIC1.36□□□□□ -2.19
MACF1Q9UPN3 AC018552.3-201ENST00000567416 561 ntBASIC1.36□□□□□ -2.19
MACF1Q9UPN3 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
MACF1Q9UPN3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC1.35□□□□□ -2.19
MACF1Q9UPN3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
MACF1Q9UPN3 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
MACF1Q9UPN3 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
MACF1Q9UPN3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
MACF1Q9UPN3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
MACF1Q9UPN3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
MACF1Q9UPN3 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
MACF1Q9UPN3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.35□□□□□ -2.19
MACF1Q9UPN3 RNU6-1032P-201ENST00000384100 107 ntBASIC1.35□□□□□ -2.19
MACF1Q9UPN3 MIR27B-201ENST00000385129 97 ntBASIC1.35□□□□□ -2.19
MACF1Q9UPN3 AL356968.1-201ENST00000416622 474 ntBASIC1.35□□□□□ -2.19
MACF1Q9UPN3 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC1.35□□□□□ -2.19
MACF1Q9UPN3 MORF4L1P6-201ENST00000418771 268 ntBASIC1.35□□□□□ -2.19
MACF1Q9UPN3 OR5AW1P-201ENST00000426334 1006 ntBASIC1.35□□□□□ -2.19
MACF1Q9UPN3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC1.35□□□□□ -2.19
MACF1Q9UPN3 APOOP4-201ENST00000513530 597 ntBASIC1.35□□□□□ -2.19
MACF1Q9UPN3 AC008083.2-201ENST00000546707 476 ntBASIC1.35□□□□□ -2.19
MACF1Q9UPN3 MKKS-203ENST00000609375 882 ntTSL 2 BASIC1.35□□□□□ -2.19
MACF1Q9UPN3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
MACF1Q9UPN3 AL353684.1-201ENST00000622677 1120 ntBASIC1.35□□□□□ -2.19
MACF1Q9UPN3 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
MACF1Q9UPN3 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
MACF1Q9UPN3 AL133412.1-201ENST00000380194 2992 ntBASIC1.35□□□□□ -2.19
MACF1Q9UPN3 ZNF209P-201ENST00000593450 2304 ntBASIC1.35□□□□□ -2.19
MACF1Q9UPN3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
MACF1Q9UPN3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
MACF1Q9UPN3 AL139276.1-201ENST00000311910 1001 ntBASIC1.35□□□□□ -2.19
MACF1Q9UPN3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
MACF1Q9UPN3 RNU4-47P-201ENST00000410876 114 ntBASIC1.35□□□□□ -2.19
MACF1Q9UPN3 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.35□□□□□ -2.19
MACF1Q9UPN3 RPL31P35-201ENST00000431058 377 ntBASIC1.35□□□□□ -2.19
MACF1Q9UPN3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC1.35□□□□□ -2.19
MACF1Q9UPN3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
MACF1Q9UPN3 RPPH1-2P-201ENST00000516688 293 ntBASIC1.35□□□□□ -2.19
MACF1Q9UPN3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.35□□□□□ -2.19
MACF1Q9UPN3 DNAJC8P1-201ENST00000554535 372 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms