RNA–Protein interactions for RNA: ENST00000263045.8

CRISP3-201, Transcript of cysteine rich secretory protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CRISP3, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRISP3-201ENST00000263045 AEBP2Q6ZN18 517 aaPredicted RBP19.37■□□□□ 0.69
CRISP3-201ENST00000263045 CHIC1Q5VXU3 224 aa18.37■□□□□ 0.53
CRISP3-201ENST00000263045 SENP3Q9H4L4 574 aaPredicted RBP16.51■□□□□ 0.23
CRISP3-201ENST00000263045 PHF23Q9BUL5 403 aaPredicted RBP16.31■□□□□ 0.2
CRISP3-201ENST00000263045 FOXD1Q16676 465 aa15.41■□□□□ 0.06
CRISP3-201ENST00000263045 PLPPR3Q6T4P5 718 aa14.66□□□□□ -0.06
CRISP3-201ENST00000263045 MSH5O43196 834 aa14.41□□□□□ -0.1
CRISP3-201ENST00000263045 PPP6R1Q9UPN7 881 aa14.4□□□□□ -0.1
CRISP3-201ENST00000263045 PIAS4Q8N2W9 510 aaPredicted RBP14.38□□□□□ -0.11
CRISP3-201ENST00000263045 ADRA2BP18089 450 aa14.34□□□□□ -0.11
CRISP3-201ENST00000263045 POTEDQ86YR6 584 aa14.12□□□□□ -0.15
CRISP3-201ENST00000263045 MAPK8IP2Q13387 824 aaPredicted RBP13.18□□□□□ -0.3
CRISP3-201ENST00000263045 SCAF1Q9H7N4 1312 aaKnown RBP13.11□□□□□ -0.31
CRISP3-201ENST00000263045 DMRT2Q9Y5R5 561 aa13.1□□□□□ -0.31
CRISP3-201ENST00000263045 PPP4R3CPQ6ZMV5 832 aa12.85□□□□□ -0.35
CRISP3-201ENST00000263045 HOXD11P31277 338 aaPredicted RBP12.62□□□□□ -0.39
CRISP3-201ENST00000263045 CNKSR2Q8WXI2 1034 aa12.62□□□□□ -0.39
CRISP3-201ENST00000263045 DCAF8L1A6NGE4 600 aa12.54□□□□□ -0.4
CRISP3-201ENST00000263045 RNF216Q9NWF9 866 aaPredicted RBP12.51□□□□□ -0.41
CRISP3-201ENST00000263045 CACNB1Q02641 598 aaPredicted RBP12.38□□□□□ -0.43
CRISP3-201ENST00000263045 NCBP3Q53F19 620 aaKnown RBP12.34□□□□□ -0.43
CRISP3-201ENST00000263045 RNF39Q9H2S5 420 aa12.3□□□□□ -0.44
CRISP3-201ENST00000263045 DNAJC5BQ9UF47 199 aa12.19□□□□□ -0.46
CRISP3-201ENST00000263045 NPM3O75607 178 aaKnown RBP12.17□□□□□ -0.46
CRISP3-201ENST00000263045 C1QBPQ07021 282 aaKnown RBP12.12□□□□□ -0.47
CRISP3-201ENST00000263045 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12□□□□□ -0.49
CRISP3-201ENST00000263045 KCNA4P22459 653 aa11.92□□□□□ -0.5
CRISP3-201ENST00000263045 U3KPZ7 1027 aaPredicted RBP11.76□□□□□ -0.53
CRISP3-201ENST00000263045 SLC4A2P04920 1241 aa11.64□□□□□ -0.55
CRISP3-201ENST00000263045 SPINK5Q9NQ38 1064 aaPredicted RBP11.6□□□□□ -0.55
CRISP3-201ENST00000263045 CAPN15O75808 1086 aa11.56□□□□□ -0.56
CRISP3-201ENST00000263045 DSG3P32926 999 aa11.52□□□□□ -0.57
CRISP3-201ENST00000263045 APLP2Q06481 763 aa11.41□□□□□ -0.58
CRISP3-201ENST00000263045 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.4□□□□□ -0.58
CRISP3-201ENST00000263045 HNRNPUL2Q1KMD3 747 aaKnown RBP11.4□□□□□ -0.58
CRISP3-201ENST00000263045 TRHP20396 242 aaPredicted RBP11.38□□□□□ -0.59
CRISP3-201ENST00000263045 ZNF219Q9P2Y4 722 aaPredicted RBP11.35□□□□□ -0.59
CRISP3-201ENST00000263045 SAMD1Q6SPF0 538 aaPredicted RBP11.34□□□□□ -0.59
CRISP3-201ENST00000263045 ABCB7O75027 752 aa11.3□□□□□ -0.6
CRISP3-201ENST00000263045 MYCNP04198 464 aaPredicted RBP11.25□□□□□ -0.61
CRISP3-201ENST00000263045 SLC4A1APQ9BWU0 796 aaKnown RBP11.24□□□□□ -0.61
CRISP3-201ENST00000263045 FOXD4L1Q9NU39 408 aa11.13□□□□□ -0.63
CRISP3-201ENST00000263045 POLA2Q14181 598 aa11.08□□□□□ -0.64
CRISP3-201ENST00000263045 POTEHQ6S545 545 aa11.05□□□□□ -0.64
CRISP3-201ENST00000263045 ATF5Q9Y2D1 282 aaPredicted RBP11.01□□□□□ -0.65
CRISP3-201ENST00000263045 RBM42Q9BTD8 480 aaKnown RBP10.98□□□□□ -0.65
CRISP3-201ENST00000263045 ZBTB22O15209 634 aa10.96□□□□□ -0.65
CRISP3-201ENST00000263045 ZBTB12Q9Y330 459 aaPredicted RBP10.83□□□□□ -0.68
CRISP3-201ENST00000263045 ATXN8OSP0DMR3 200 aa10.79□□□□□ -0.68
CRISP3-201ENST00000263045 CHRDL2Q6WN34 429 aa10.75□□□□□ -0.69
CRISP3-201ENST00000263045 AKT1S1Q96B36 256 aa10.73□□□□□ -0.69
CRISP3-201ENST00000263045 OSCARQ8IYS5 282 aa10.72□□□□□ -0.69
CRISP3-201ENST00000263045 REM2Q8IYK8 340 aaPredicted RBP10.63□□□□□ -0.71
CRISP3-201ENST00000263045 FBLN2P98095 1184 aa10.56□□□□□ -0.72
CRISP3-201ENST00000263045 PITPNM1O00562 1244 aa10.52□□□□□ -0.73
CRISP3-201ENST00000263045 SPDYE2BA6NHP3 402 aa10.51□□□□□ -0.73
CRISP3-201ENST00000263045 SPDYE6P0CI01 402 aa10.51□□□□□ -0.73
CRISP3-201ENST00000263045 SPDYE2Q495Y8 402 aa10.51□□□□□ -0.73
CRISP3-201ENST00000263045 MKRN4PQ13434 485 aaPredicted RBP10.5□□□□□ -0.73
CRISP3-201ENST00000263045 PIP4P2Q8N4L2 257 aa10.49□□□□□ -0.73
CRISP3-201ENST00000263045 EHMT2Q96KQ7 1210 aa10.48□□□□□ -0.73
CRISP3-201ENST00000263045 CSRNP3Q8WYN3 585 aa10.44□□□□□ -0.74
CRISP3-201ENST00000263045 FXR2P51116 673 aaKnown RBP eCLIP10.43□□□□□ -0.74
CRISP3-201ENST00000263045 ZNF692Q9BU19 519 aaPredicted RBP10.38□□□□□ -0.75
CRISP3-201ENST00000263045 SSUH2Q9Y2M2 353 aa10.37□□□□□ -0.75
CRISP3-201ENST00000263045 SP7Q8TDD2 431 aaPredicted RBP10.35□□□□□ -0.75
CRISP3-201ENST00000263045 SPDYE1Q8NFV5 336 aaPredicted RBP10.33□□□□□ -0.76
CRISP3-201ENST00000263045 HAX1O00165 279 aa10.31□□□□□ -0.76
CRISP3-201ENST00000263045 CLEC11AQ9Y240 323 aa10.31□□□□□ -0.76
CRISP3-201ENST00000263045 PRKAR2AP13861 404 aaKnown RBP10.24□□□□□ -0.77
CRISP3-201ENST00000263045 PABPN1Q86U42 306 aaKnown RBP eCLIP10.22□□□□□ -0.77
CRISP3-201ENST00000263045 EVX2Q03828 476 aa10.19□□□□□ -0.78
CRISP3-201ENST00000263045 PRR29P0C7W0 189 aa10.14□□□□□ -0.79
CRISP3-201ENST00000263045 CHADLQ6NUI6 762 aa10.12□□□□□ -0.79
CRISP3-201ENST00000263045 C19orf67A6NJJ6 358 aa10.1□□□□□ -0.79
CRISP3-201ENST00000263045 SPDYE4A6NLX3 237 aa9.98□□□□□ -0.81
CRISP3-201ENST00000263045 FARP1Q9Y4F1 1045 aaPredicted RBP9.97□□□□□ -0.81
CRISP3-201ENST00000263045 GABBR2O75899 941 aa9.95□□□□□ -0.82
CRISP3-201ENST00000263045 STAG3Q9UJ98 1225 aa9.94□□□□□ -0.82
CRISP3-201ENST00000263045 CD44P16070 742 aaKnown RBP9.91□□□□□ -0.82
CRISP3-201ENST00000263045 CREBZFQ9NS37 354 aa9.89□□□□□ -0.83
CRISP3-201ENST00000263045 CLCN6P51797 869 aa9.79□□□□□ -0.84
CRISP3-201ENST00000263045 ZRANB1Q9UGI0 708 aa9.77□□□□□ -0.85
CRISP3-201ENST00000263045 ZNF579Q8NAF0 562 aaKnown RBP9.76□□□□□ -0.85
CRISP3-201ENST00000263045 PROM2Q8N271 834 aa9.75□□□□□ -0.85
CRISP3-201ENST00000263045 SLC24A1O60721 1099 aa9.75□□□□□ -0.85
CRISP3-201ENST00000263045 POTEIP0CG38 1075 aa9.75□□□□□ -0.85
CRISP3-201ENST00000263045 MNX1P50219 401 aaPredicted RBP9.73□□□□□ -0.85
CRISP3-201ENST00000263045 LHX8Q68G74 356 aa9.71□□□□□ -0.86
CRISP3-201ENST00000263045 NPM1P06748 294 aaKnown RBP eCLIP9.7□□□□□ -0.86
CRISP3-201ENST00000263045 PAK3O75914 559 aaPredicted RBP9.67□□□□□ -0.86
CRISP3-201ENST00000263045 DCBLD2Q96PD2 775 aa9.67□□□□□ -0.86
CRISP3-201ENST00000263045 GALR2O43603 387 aaPredicted RBP9.65□□□□□ -0.86
CRISP3-201ENST00000263045 PHF12Q96QT6 1004 aa9.63□□□□□ -0.87
CRISP3-201ENST00000263045 RTN4Q9NQC3 1192 aaKnown RBP9.55□□□□□ -0.88
CRISP3-201ENST00000263045 MIER1Q8N108 512 aa9.53□□□□□ -0.88
CRISP3-201ENST00000263045 TSPYL2Q9H2G4 693 aaPredicted RBP9.52□□□□□ -0.89
CRISP3-201ENST00000263045 PLEKHG5O94827 1062 aa9.51□□□□□ -0.89
CRISP3-201ENST00000263045 MS4A3Q96HJ5 214 aa9.5□□□□□ -0.89
CRISP3-201ENST00000263045 CCDC61Q9Y6R9 512 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms