RNA–Protein interactions for RNA: ENST00000425508.6

BBS9-205, Transcript of Bardet-Biedl syndrome 9, humanhuman

TSL 1 (best) BASIC

Gene BBS9, Length 1,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS9-205ENST00000425508 AEBP2Q6ZN18 517 aaPredicted RBP25.93■■□□□ 1.74
BBS9-205ENST00000425508 CHIC1Q5VXU3 224 aa24.68■■□□□ 1.54
BBS9-205ENST00000425508 SENP3Q9H4L4 574 aaPredicted RBP22.03■■□□□ 1.12
BBS9-205ENST00000425508 PHF23Q9BUL5 403 aaPredicted RBP21.82■■□□□ 1.08
BBS9-205ENST00000425508 FOXD1Q16676 465 aa20.58■□□□□ 0.89
BBS9-205ENST00000425508 PLPPR3Q6T4P5 718 aa19.75■□□□□ 0.75
BBS9-205ENST00000425508 PPP6R1Q9UPN7 881 aa19.38■□□□□ 0.69
BBS9-205ENST00000425508 ADRA2BP18089 450 aa19.33■□□□□ 0.68
BBS9-205ENST00000425508 PIAS4Q8N2W9 510 aaPredicted RBP19.25■□□□□ 0.67
BBS9-205ENST00000425508 MSH5O43196 834 aa19.13■□□□□ 0.65
BBS9-205ENST00000425508 POTEDQ86YR6 584 aa18.57■□□□□ 0.56
BBS9-205ENST00000425508 MAPK8IP2Q13387 824 aaPredicted RBP17.74■□□□□ 0.43
BBS9-205ENST00000425508 SCAF1Q9H7N4 1312 aaKnown RBP17.58■□□□□ 0.4
BBS9-205ENST00000425508 DMRT2Q9Y5R5 561 aa17.5■□□□□ 0.39
BBS9-205ENST00000425508 PPP4R3CPQ6ZMV5 832 aa17.38■□□□□ 0.37
BBS9-205ENST00000425508 CNKSR2Q8WXI2 1034 aa16.98■□□□□ 0.31
BBS9-205ENST00000425508 HOXD11P31277 338 aaPredicted RBP16.88■□□□□ 0.29
BBS9-205ENST00000425508 DCAF8L1A6NGE4 600 aa16.86■□□□□ 0.29
BBS9-205ENST00000425508 RNF216Q9NWF9 866 aaPredicted RBP16.78■□□□□ 0.28
BBS9-205ENST00000425508 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
BBS9-205ENST00000425508 NPM3O75607 178 aaKnown RBP16.5■□□□□ 0.23
BBS9-205ENST00000425508 CACNB1Q02641 598 aaPredicted RBP16.43■□□□□ 0.22
BBS9-205ENST00000425508 RNF39Q9H2S5 420 aa16.37■□□□□ 0.21
BBS9-205ENST00000425508 KCNA4P22459 653 aa16.31■□□□□ 0.2
BBS9-205ENST00000425508 DNAJC5BQ9UF47 199 aa16.2■□□□□ 0.18
BBS9-205ENST00000425508 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.15■□□□□ 0.18
BBS9-205ENST00000425508 C1QBPQ07021 282 aaKnown RBP16.12■□□□□ 0.17
BBS9-205ENST00000425508 U3KPZ7 1027 aaPredicted RBP15.8■□□□□ 0.12
BBS9-205ENST00000425508 SLC4A2P04920 1241 aa15.74■□□□□ 0.11
BBS9-205ENST00000425508 SPINK5Q9NQ38 1064 aaPredicted RBP15.58■□□□□ 0.08
BBS9-205ENST00000425508 CAPN15O75808 1086 aa15.53■□□□□ 0.08
BBS9-205ENST00000425508 DSG3P32926 999 aa15.4■□□□□ 0.06
BBS9-205ENST00000425508 SLC4A1APQ9BWU0 796 aaKnown RBP15.39■□□□□ 0.05
BBS9-205ENST00000425508 TRHP20396 242 aaPredicted RBP15.33■□□□□ 0.04
BBS9-205ENST00000425508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.32■□□□□ 0.04
BBS9-205ENST00000425508 HNRNPUL2Q1KMD3 747 aaKnown RBP15.32■□□□□ 0.04
BBS9-205ENST00000425508 APLP2Q06481 763 aa15.28■□□□□ 0.04
BBS9-205ENST00000425508 SAMD1Q6SPF0 538 aaPredicted RBP15.26■□□□□ 0.03
BBS9-205ENST00000425508 ABCB7O75027 752 aa15.21■□□□□ 0.03
BBS9-205ENST00000425508 MYCNP04198 464 aaPredicted RBP15.21■□□□□ 0.03
BBS9-205ENST00000425508 ZNF219Q9P2Y4 722 aaPredicted RBP15.2■□□□□ 0.02
BBS9-205ENST00000425508 FOXD4L1Q9NU39 408 aa15.12■□□□□ 0.01
BBS9-205ENST00000425508 ZBTB22O15209 634 aa15□□□□□ -0.01
BBS9-205ENST00000425508 POLA2Q14181 598 aa14.94□□□□□ -0.02
BBS9-205ENST00000425508 ATF5Q9Y2D1 282 aaPredicted RBP14.94□□□□□ -0.02
BBS9-205ENST00000425508 RBM42Q9BTD8 480 aaKnown RBP14.62□□□□□ -0.07
BBS9-205ENST00000425508 ATXN8OSP0DMR3 200 aa14.6□□□□□ -0.07
BBS9-205ENST00000425508 POTEHQ6S545 545 aa14.56□□□□□ -0.08
BBS9-205ENST00000425508 ZBTB12Q9Y330 459 aaPredicted RBP14.53□□□□□ -0.08
BBS9-205ENST00000425508 OSCARQ8IYS5 282 aa14.44□□□□□ -0.1
BBS9-205ENST00000425508 CSRNP3Q8WYN3 585 aa14.41□□□□□ -0.1
BBS9-205ENST00000425508 AKT1S1Q96B36 256 aa14.33□□□□□ -0.12
BBS9-205ENST00000425508 EHMT2Q96KQ7 1210 aa14.32□□□□□ -0.12
BBS9-205ENST00000425508 CHRDL2Q6WN34 429 aa14.31□□□□□ -0.12
BBS9-205ENST00000425508 FBLN2P98095 1184 aa14.27□□□□□ -0.13
BBS9-205ENST00000425508 REM2Q8IYK8 340 aaPredicted RBP14.25□□□□□ -0.13
BBS9-205ENST00000425508 MKRN4PQ13434 485 aaPredicted RBP14.24□□□□□ -0.13
BBS9-205ENST00000425508 SPDYE2BA6NHP3 402 aa14.13□□□□□ -0.15
BBS9-205ENST00000425508 SPDYE6P0CI01 402 aa14.13□□□□□ -0.15
BBS9-205ENST00000425508 SPDYE2Q495Y8 402 aa14.13□□□□□ -0.15
BBS9-205ENST00000425508 PITPNM1O00562 1244 aa14.09□□□□□ -0.15
BBS9-205ENST00000425508 ZNF692Q9BU19 519 aaPredicted RBP14.03□□□□□ -0.16
BBS9-205ENST00000425508 PIP4P2Q8N4L2 257 aa14.01□□□□□ -0.17
BBS9-205ENST00000425508 SSUH2Q9Y2M2 353 aa13.96□□□□□ -0.17
BBS9-205ENST00000425508 FXR2P51116 673 aaKnown RBP eCLIP13.92□□□□□ -0.18
BBS9-205ENST00000425508 CLEC11AQ9Y240 323 aa13.91□□□□□ -0.18
BBS9-205ENST00000425508 SPDYE1Q8NFV5 336 aaPredicted RBP13.86□□□□□ -0.19
BBS9-205ENST00000425508 PABPN1Q86U42 306 aaKnown RBP eCLIP13.84□□□□□ -0.19
BBS9-205ENST00000425508 HAX1O00165 279 aa13.76□□□□□ -0.21
BBS9-205ENST00000425508 PRKAR2AP13861 404 aaKnown RBP13.74□□□□□ -0.21
BBS9-205ENST00000425508 SP7Q8TDD2 431 aaPredicted RBP13.69□□□□□ -0.22
BBS9-205ENST00000425508 PRR29P0C7W0 189 aa13.67□□□□□ -0.22
BBS9-205ENST00000425508 CHADLQ6NUI6 762 aa13.65□□□□□ -0.22
BBS9-205ENST00000425508 EVX2Q03828 476 aa13.63□□□□□ -0.23
BBS9-205ENST00000425508 SPDYE4A6NLX3 237 aa13.6□□□□□ -0.23
BBS9-205ENST00000425508 C19orf67A6NJJ6 358 aa13.47□□□□□ -0.25
BBS9-205ENST00000425508 STAG3Q9UJ98 1225 aa13.41□□□□□ -0.26
BBS9-205ENST00000425508 FARP1Q9Y4F1 1045 aaPredicted RBP13.41□□□□□ -0.26
BBS9-205ENST00000425508 CREBZFQ9NS37 354 aa13.35□□□□□ -0.27
BBS9-205ENST00000425508 CD44P16070 742 aaKnown RBP13.3□□□□□ -0.28
BBS9-205ENST00000425508 GABBR2O75899 941 aa13.28□□□□□ -0.28
BBS9-205ENST00000425508 PROM2Q8N271 834 aa13.23□□□□□ -0.29
BBS9-205ENST00000425508 ZRANB1Q9UGI0 708 aa13.15□□□□□ -0.3
BBS9-205ENST00000425508 MNX1P50219 401 aaPredicted RBP13.12□□□□□ -0.31
BBS9-205ENST00000425508 NPM1P06748 294 aaKnown RBP eCLIP13.07□□□□□ -0.32
BBS9-205ENST00000425508 FKBP8Q14318 412 aa13.07□□□□□ -0.32
BBS9-205ENST00000425508 ZNF579Q8NAF0 562 aaKnown RBP13.05□□□□□ -0.32
BBS9-205ENST00000425508 PAK3O75914 559 aaPredicted RBP13.01□□□□□ -0.33
BBS9-205ENST00000425508 POTEIP0CG38 1075 aa13.01□□□□□ -0.33
BBS9-205ENST00000425508 MIER1Q8N108 512 aa13□□□□□ -0.33
BBS9-205ENST00000425508 PHF12Q96QT6 1004 aa12.99□□□□□ -0.33
BBS9-205ENST00000425508 CLCN6P51797 869 aa12.98□□□□□ -0.33
BBS9-205ENST00000425508 GALR2O43603 387 aaPredicted RBP12.95□□□□□ -0.34
BBS9-205ENST00000425508 DCBLD2Q96PD2 775 aa12.93□□□□□ -0.34
BBS9-205ENST00000425508 TSPYL2Q9H2G4 693 aaPredicted RBP12.92□□□□□ -0.34
BBS9-205ENST00000425508 PLEKHG5O94827 1062 aa12.9□□□□□ -0.34
BBS9-205ENST00000425508 PLCD3Q8N3E9 789 aa12.89□□□□□ -0.35
BBS9-205ENST00000425508 LHX8Q68G74 356 aa12.87□□□□□ -0.35
BBS9-205ENST00000425508 RASEFQ8IZ41 740 aa12.8□□□□□ -0.36
BBS9-205ENST00000425508 MS4A3Q96HJ5 214 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms