RNA–Protein interactions for RNA: ENST00000284136.10

SEMA3D-201, Transcript of semaphorin 3D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEMA3D, Length 6,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-201ENST00000284136 DCAF8L2P0C7V8 631 aa7.52□□□□□ -1.21
SEMA3D-201ENST00000284136 AEBP2Q6ZN18 517 aaPredicted RBP7.08□□□□□ -1.28
SEMA3D-201ENST00000284136 TRIM41Q8WV44 630 aa6.88□□□□□ -1.31
SEMA3D-201ENST00000284136 PLPPR3Q6T4P5 718 aa6.73□□□□□ -1.33
SEMA3D-201ENST00000284136 TRHP20396 242 aaPredicted RBP6.69□□□□□ -1.34
SEMA3D-201ENST00000284136 EHMT2Q96KQ7 1210 aa6.63□□□□□ -1.35
SEMA3D-201ENST00000284136 TTBK1Q5TCY1 1321 aaPredicted RBP6.63□□□□□ -1.35
SEMA3D-201ENST00000284136 CHIC1Q5VXU3 224 aa6.59□□□□□ -1.35
SEMA3D-201ENST00000284136 MYT1LQ9UL68 1186 aa6.58□□□□□ -1.36
SEMA3D-201ENST00000284136 SENP3Q9H4L4 574 aaPredicted RBP6.58□□□□□ -1.36
SEMA3D-201ENST00000284136 SCAF1Q9H7N4 1312 aaKnown RBP6.47□□□□□ -1.37
SEMA3D-201ENST00000284136 FAM9AQ8IZU1 332 aaPredicted RBP6.44□□□□□ -1.38
SEMA3D-201ENST00000284136 PHF23Q9BUL5 403 aaPredicted RBP6.42□□□□□ -1.38
SEMA3D-201ENST00000284136 FBLN2P98095 1184 aa6.39□□□□□ -1.39
SEMA3D-201ENST00000284136 PABPN1Q86U42 306 aaKnown RBP eCLIP6.32□□□□□ -1.4
SEMA3D-201ENST00000284136 ATP1B4Q9UN42 357 aaPredicted RBP6.26□□□□□ -1.41
SEMA3D-201ENST00000284136 ABCC9O60706 1549 aa6.24□□□□□ -1.41
SEMA3D-201ENST00000284136 RANGAP1P46060 587 aaPredicted RBP6.22□□□□□ -1.41
SEMA3D-201ENST00000284136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.22□□□□□ -1.41
SEMA3D-201ENST00000284136 HNRNPUL2Q1KMD3 747 aaKnown RBP6.22□□□□□ -1.41
SEMA3D-201ENST00000284136 BCANQ96GW7 911 aa6.2□□□□□ -1.42
SEMA3D-201ENST00000284136 DCAF8L1A6NGE4 600 aa6.19□□□□□ -1.42
SEMA3D-201ENST00000284136 A0A0G2JS52 829 aa6.16□□□□□ -1.42
SEMA3D-201ENST00000284136 ESF1Q9H501 851 aaKnown RBP6.14□□□□□ -1.43
SEMA3D-201ENST00000284136 MYT1Q01538 1121 aa6.12□□□□□ -1.43
SEMA3D-201ENST00000284136 ARID4BQ4LE39 1312 aaPredicted RBP6.11□□□□□ -1.43
SEMA3D-201ENST00000284136 PLEKHG5O94827 1062 aa6.11□□□□□ -1.43
SEMA3D-201ENST00000284136 NPM1P06748 294 aaKnown RBP eCLIP6.1□□□□□ -1.43
SEMA3D-201ENST00000284136 CFAP44Q96MT7 982 aa6□□□□□ -1.45
SEMA3D-201ENST00000284136 NISCHQ9Y2I1 1504 aa5.97□□□□□ -1.45
SEMA3D-201ENST00000284136 KLHL34Q8N239 644 aa5.95□□□□□ -1.46
SEMA3D-201ENST00000284136 MEX3CQ5U5Q3 659 aaKnown RBP5.95□□□□□ -1.46
SEMA3D-201ENST00000284136 C14orf37Q86TY3 774 aa5.95□□□□□ -1.46
SEMA3D-201ENST00000284136 ERCC6Q03468 1493 aa5.95□□□□□ -1.46
SEMA3D-201ENST00000284136 HAP1P54257 671 aaPredicted RBP5.93□□□□□ -1.46
SEMA3D-201ENST00000284136 CYB5RLQ6IPT4 315 aa5.92□□□□□ -1.46
SEMA3D-201ENST00000284136 FOXD1Q16676 465 aa5.92□□□□□ -1.46
SEMA3D-201ENST00000284136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.91□□□□□ -1.46
SEMA3D-201ENST00000284136 SHROOM4Q9ULL8 1493 aa5.91□□□□□ -1.46
SEMA3D-201ENST00000284136 PELP1Q8IZL8 1130 aaKnown RBP5.9□□□□□ -1.46
SEMA3D-201ENST00000284136 ARID3CA6NKF2 412 aa5.88□□□□□ -1.47
SEMA3D-201ENST00000284136 SLC4A1APQ9BWU0 796 aaKnown RBP5.88□□□□□ -1.47
SEMA3D-201ENST00000284136 DISP3Q9P2K9 1392 aa5.86□□□□□ -1.47
SEMA3D-201ENST00000284136 MLECQ14165 292 aa5.86□□□□□ -1.47
SEMA3D-201ENST00000284136 CAPN15O75808 1086 aa5.86□□□□□ -1.47
SEMA3D-201ENST00000284136 PIP4K2BP78356 416 aa5.86□□□□□ -1.47
SEMA3D-201ENST00000284136 STAG3Q9UJ98 1225 aa5.85□□□□□ -1.47
SEMA3D-201ENST00000284136 SLC24A1O60721 1099 aa5.84□□□□□ -1.47
SEMA3D-201ENST00000284136 CCDC9Q9Y3X0 531 aaKnown RBP5.84□□□□□ -1.48
SEMA3D-201ENST00000284136 CHMP7Q8WUX9 453 aaPredicted RBP5.82□□□□□ -1.48
SEMA3D-201ENST00000284136 ZBTB7CA1YPR0 619 aa5.82□□□□□ -1.48
SEMA3D-201ENST00000284136 PPP1R1BQ9UD71 204 aaPredicted RBP5.78□□□□□ -1.48
SEMA3D-201ENST00000284136 SF3B2Q13435 895 aaKnown RBP5.77□□□□□ -1.49
SEMA3D-201ENST00000284136 SUPT5HO00267 1087 aaKnown RBP5.75□□□□□ -1.49
SEMA3D-201ENST00000284136 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.74□□□□□ -1.49
SEMA3D-201ENST00000284136 LMOD2Q6P5Q4 547 aa5.72□□□□□ -1.49
SEMA3D-201ENST00000284136 NUTM2BA6NNL0 878 aaPredicted RBP5.72□□□□□ -1.49
SEMA3D-201ENST00000284136 NUTM2EB1AL46 878 aaPredicted RBP5.72□□□□□ -1.49
SEMA3D-201ENST00000284136 NUTM2DQ5VT03 806 aaPredicted RBP5.72□□□□□ -1.49
SEMA3D-201ENST00000284136 NUTM2AQ8IVF1 878 aaPredicted RBP5.72□□□□□ -1.49
SEMA3D-201ENST00000284136 KCNH8Q96L42 1107 aa5.7□□□□□ -1.5
SEMA3D-201ENST00000284136 APLP2Q06481 763 aa5.69□□□□□ -1.5
SEMA3D-201ENST00000284136 CHGAP10645 457 aaKnown RBP5.68□□□□□ -1.5
SEMA3D-201ENST00000284136 MSH5O43196 834 aa5.68□□□□□ -1.5
SEMA3D-201ENST00000284136 OSCARQ8IYS5 282 aa5.66□□□□□ -1.5
SEMA3D-201ENST00000284136 NPHP1O15259 732 aa5.66□□□□□ -1.5
SEMA3D-201ENST00000284136 DNAJC5Q9H3Z4 198 aa5.65□□□□□ -1.5
SEMA3D-201ENST00000284136 ILDR1Q86SU0 546 aaPredicted RBP5.63□□□□□ -1.51
SEMA3D-201ENST00000284136 TRIM52Q96A61 297 aa5.63□□□□□ -1.51
SEMA3D-201ENST00000284136 PAXIP1Q6ZW49 1069 aaPredicted RBP5.62□□□□□ -1.51
SEMA3D-201ENST00000284136 ARXQ96QS3 562 aa5.61□□□□□ -1.51
SEMA3D-201ENST00000284136 DNAJC5BQ9UF47 199 aa5.59□□□□□ -1.51
SEMA3D-201ENST00000284136 PPP1R15AO75807 674 aaPredicted RBP5.59□□□□□ -1.52
SEMA3D-201ENST00000284136 ZNF777Q9ULD5 760 aaPredicted RBP5.58□□□□□ -1.52
SEMA3D-201ENST00000284136 UBAP1LF5GYI3 381 aa5.57□□□□□ -1.52
SEMA3D-201ENST00000284136 GRM1Q13255 1194 aa5.56□□□□□ -1.52
SEMA3D-201ENST00000284136 SENP3-EIF4A1A0A087X0R7 540 aa5.56□□□□□ -1.52
SEMA3D-201ENST00000284136 C16orf71Q8IYS4 520 aaPredicted RBP5.55□□□□□ -1.52
SEMA3D-201ENST00000284136 FAM69CQ0P6D2 419 aa5.55□□□□□ -1.52
SEMA3D-201ENST00000284136 POLR3GLQ9BT43 218 aa5.54□□□□□ -1.52
SEMA3D-201ENST00000284136 NEUROD2Q15784 382 aa5.53□□□□□ -1.52
SEMA3D-201ENST00000284136 CNGB1Q14028 1251 aaPredicted RBP5.52□□□□□ -1.53
SEMA3D-201ENST00000284136 NPM2Q86SE8 214 aaKnown RBP5.52□□□□□ -1.53
SEMA3D-201ENST00000284136 PPP6R1Q9UPN7 881 aa5.51□□□□□ -1.53
SEMA3D-201ENST00000284136 LMTK3Q96Q04 1460 aa5.51□□□□□ -1.53
SEMA3D-201ENST00000284136 ADRA2BP18089 450 aa5.49□□□□□ -1.53
SEMA3D-201ENST00000284136 P3H3Q8IVL6 736 aa5.49□□□□□ -1.53
SEMA3D-201ENST00000284136 UBTFP17480 764 aaKnown RBP5.49□□□□□ -1.53
SEMA3D-201ENST00000284136 RBM33Q96EV2 1170 aaKnown RBP5.48□□□□□ -1.53
SEMA3D-201ENST00000284136 KRI1Q8N9T8 703 aaKnown RBP5.47□□□□□ -1.53
SEMA3D-201ENST00000284136 ZNF526Q8TF50 670 aaPredicted RBP5.46□□□□□ -1.54
SEMA3D-201ENST00000284136 ZRANB1Q9UGI0 708 aa5.46□□□□□ -1.54
SEMA3D-201ENST00000284136 CECR2Q9BXF3 1484 aa5.46□□□□□ -1.54
SEMA3D-201ENST00000284136 ITGAEP38570 1179 aa5.45□□□□□ -1.54
SEMA3D-201ENST00000284136 CSRNP3Q8WYN3 585 aa5.42□□□□□ -1.54
SEMA3D-201ENST00000284136 BCL11AQ9H165 835 aa5.42□□□□□ -1.54
SEMA3D-201ENST00000284136 WWC3Q9ULE0 1092 aa5.4□□□□□ -1.54
SEMA3D-201ENST00000284136 ZNF326Q5BKZ1 582 aaKnown RBP5.39□□□□□ -1.55
SEMA3D-201ENST00000284136 BEGAINQ9BUH8 593 aa5.39□□□□□ -1.55
SEMA3D-201ENST00000284136 NCBP3Q53F19 620 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms