RNA–Protein interactions for RNA: ENST00000590645.1

ABCA6-206, Transcript of ATP binding cassette subfamily A member 6, humanhuman

TSL 1 (best) BASIC

Gene ABCA6, Length 1,511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6-206ENST00000590645 AEBP2Q6ZN18 517 aaPredicted RBP22.05■■□□□ 1.12
ABCA6-206ENST00000590645 CHIC1Q5VXU3 224 aa20.85■□□□□ 0.93
ABCA6-206ENST00000590645 SENP3Q9H4L4 574 aaPredicted RBP18.96■□□□□ 0.63
ABCA6-206ENST00000590645 PHF23Q9BUL5 403 aaPredicted RBP18.62■□□□□ 0.57
ABCA6-206ENST00000590645 FOXD1Q16676 465 aa17.6■□□□□ 0.41
ABCA6-206ENST00000590645 MSH5O43196 834 aa16.65■□□□□ 0.26
ABCA6-206ENST00000590645 PLPPR3Q6T4P5 718 aa16.63■□□□□ 0.25
ABCA6-206ENST00000590645 PIAS4Q8N2W9 510 aaPredicted RBP16.45■□□□□ 0.22
ABCA6-206ENST00000590645 POTEDQ86YR6 584 aa16.45■□□□□ 0.22
ABCA6-206ENST00000590645 PPP6R1Q9UPN7 881 aa16.28■□□□□ 0.2
ABCA6-206ENST00000590645 ADRA2BP18089 450 aa16.24■□□□□ 0.19
ABCA6-206ENST00000590645 SCAF1Q9H7N4 1312 aaKnown RBP15□□□□□ -0.01
ABCA6-206ENST00000590645 DMRT2Q9Y5R5 561 aa14.97□□□□□ -0.01
ABCA6-206ENST00000590645 MAPK8IP2Q13387 824 aaPredicted RBP14.94□□□□□ -0.02
ABCA6-206ENST00000590645 KCNA4P22459 653 aa14.78□□□□□ -0.04
ABCA6-206ENST00000590645 PPP4R3CPQ6ZMV5 832 aa14.66□□□□□ -0.06
ABCA6-206ENST00000590645 DCAF8L1A6NGE4 600 aa14.36□□□□□ -0.11
ABCA6-206ENST00000590645 HOXD11P31277 338 aaPredicted RBP14.36□□□□□ -0.11
ABCA6-206ENST00000590645 CACNB1Q02641 598 aaPredicted RBP14.35□□□□□ -0.11
ABCA6-206ENST00000590645 CNKSR2Q8WXI2 1034 aa14.31□□□□□ -0.12
ABCA6-206ENST00000590645 NCBP3Q53F19 620 aaKnown RBP14.25□□□□□ -0.13
ABCA6-206ENST00000590645 RNF216Q9NWF9 866 aaPredicted RBP14.23□□□□□ -0.13
ABCA6-206ENST00000590645 NPM3O75607 178 aaKnown RBP14.2□□□□□ -0.14
ABCA6-206ENST00000590645 RNF39Q9H2S5 420 aa14.13□□□□□ -0.15
ABCA6-206ENST00000590645 EHMT2Q96KQ7 1210 aa14.11□□□□□ -0.15
ABCA6-206ENST00000590645 SLC4A1APQ9BWU0 796 aaKnown RBP14.05□□□□□ -0.16
ABCA6-206ENST00000590645 DNAJC5BQ9UF47 199 aa13.97□□□□□ -0.17
ABCA6-206ENST00000590645 C1QBPQ07021 282 aaKnown RBP13.96□□□□□ -0.17
ABCA6-206ENST00000590645 CSRNP3Q8WYN3 585 aa13.83□□□□□ -0.2
ABCA6-206ENST00000590645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.7□□□□□ -0.22
ABCA6-206ENST00000590645 ZBTB22O15209 634 aa13.67□□□□□ -0.22
ABCA6-206ENST00000590645 FOXD4L1Q9NU39 408 aa13.41□□□□□ -0.26
ABCA6-206ENST00000590645 SLC4A2P04920 1241 aa13.36□□□□□ -0.27
ABCA6-206ENST00000590645 U3KPZ7 1027 aaPredicted RBP13.35□□□□□ -0.27
ABCA6-206ENST00000590645 CAPN15O75808 1086 aa13.23□□□□□ -0.29
ABCA6-206ENST00000590645 SPINK5Q9NQ38 1064 aaPredicted RBP13.18□□□□□ -0.3
ABCA6-206ENST00000590645 DSG3P32926 999 aa13.16□□□□□ -0.3
ABCA6-206ENST00000590645 APLP2Q06481 763 aa13.11□□□□□ -0.31
ABCA6-206ENST00000590645 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.03□□□□□ -0.32
ABCA6-206ENST00000590645 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
ABCA6-206ENST00000590645 HNRNPUL2Q1KMD3 747 aaKnown RBP13.03□□□□□ -0.32
ABCA6-206ENST00000590645 ZNF219Q9P2Y4 722 aaPredicted RBP12.99□□□□□ -0.33
ABCA6-206ENST00000590645 TRHP20396 242 aaPredicted RBP12.95□□□□□ -0.34
ABCA6-206ENST00000590645 SAMD1Q6SPF0 538 aaPredicted RBP12.92□□□□□ -0.34
ABCA6-206ENST00000590645 POTEHQ6S545 545 aa12.88□□□□□ -0.35
ABCA6-206ENST00000590645 ATXN8OSP0DMR3 200 aa12.87□□□□□ -0.35
ABCA6-206ENST00000590645 ABCB7O75027 752 aa12.86□□□□□ -0.35
ABCA6-206ENST00000590645 ATF5Q9Y2D1 282 aaPredicted RBP12.81□□□□□ -0.36
ABCA6-206ENST00000590645 RBM42Q9BTD8 480 aaKnown RBP12.67□□□□□ -0.38
ABCA6-206ENST00000590645 POLA2Q14181 598 aa12.56□□□□□ -0.4
ABCA6-206ENST00000590645 FKBP8Q14318 412 aa12.42□□□□□ -0.42
ABCA6-206ENST00000590645 ZBTB12Q9Y330 459 aaPredicted RBP12.4□□□□□ -0.42
ABCA6-206ENST00000590645 CHRDL2Q6WN34 429 aa12.38□□□□□ -0.43
ABCA6-206ENST00000590645 AKT1S1Q96B36 256 aa12.3□□□□□ -0.44
ABCA6-206ENST00000590645 MKRN4PQ13434 485 aaPredicted RBP12.25□□□□□ -0.45
ABCA6-206ENST00000590645 OSCARQ8IYS5 282 aa12.16□□□□□ -0.46
ABCA6-206ENST00000590645 REM2Q8IYK8 340 aaPredicted RBP12.13□□□□□ -0.47
ABCA6-206ENST00000590645 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
ABCA6-206ENST00000590645 FBLN2P98095 1184 aa12.04□□□□□ -0.48
ABCA6-206ENST00000590645 PIP4P2Q8N4L2 257 aa12.02□□□□□ -0.48
ABCA6-206ENST00000590645 SP7Q8TDD2 431 aaPredicted RBP12.01□□□□□ -0.49
ABCA6-206ENST00000590645 PITPNM1O00562 1244 aa12□□□□□ -0.49
ABCA6-206ENST00000590645 RTN4Q9NQC3 1192 aaKnown RBP11.98□□□□□ -0.49
ABCA6-206ENST00000590645 SPDYE2BA6NHP3 402 aa11.96□□□□□ -0.49
ABCA6-206ENST00000590645 SPDYE6P0CI01 402 aa11.96□□□□□ -0.49
ABCA6-206ENST00000590645 SPDYE2Q495Y8 402 aa11.96□□□□□ -0.49
ABCA6-206ENST00000590645 PROM2Q8N271 834 aa11.95□□□□□ -0.5
ABCA6-206ENST00000590645 FXR2P51116 673 aaKnown RBP eCLIP11.94□□□□□ -0.5
ABCA6-206ENST00000590645 HAX1O00165 279 aa11.88□□□□□ -0.51
ABCA6-206ENST00000590645 AMER1Q5JTC6 1135 aaPredicted RBP11.86□□□□□ -0.51
ABCA6-206ENST00000590645 SPDYE1Q8NFV5 336 aaPredicted RBP11.81□□□□□ -0.52
ABCA6-206ENST00000590645 ZNF692Q9BU19 519 aaPredicted RBP11.76□□□□□ -0.53
ABCA6-206ENST00000590645 FBXO3Q9UK99 471 aa11.76□□□□□ -0.53
ABCA6-206ENST00000590645 CLEC11AQ9Y240 323 aa11.75□□□□□ -0.53
ABCA6-206ENST00000590645 SSUH2Q9Y2M2 353 aa11.75□□□□□ -0.53
ABCA6-206ENST00000590645 PRKAR2AP13861 404 aaKnown RBP11.7□□□□□ -0.54
ABCA6-206ENST00000590645 VASPP50552 380 aaPredicted RBP11.7□□□□□ -0.54
ABCA6-206ENST00000590645 EVX2Q03828 476 aa11.61□□□□□ -0.55
ABCA6-206ENST00000590645 IFNLR1Q8IU57 520 aaPredicted RBP11.61□□□□□ -0.55
ABCA6-206ENST00000590645 PABPN1Q86U42 306 aaKnown RBP eCLIP11.6□□□□□ -0.55
ABCA6-206ENST00000590645 C19orf67A6NJJ6 358 aa11.57□□□□□ -0.56
ABCA6-206ENST00000590645 PRR29P0C7W0 189 aa11.55□□□□□ -0.56
ABCA6-206ENST00000590645 CHADLQ6NUI6 762 aa11.49□□□□□ -0.57
ABCA6-206ENST00000590645 STAG3Q9UJ98 1225 aa11.45□□□□□ -0.58
ABCA6-206ENST00000590645 GABBR2O75899 941 aa11.42□□□□□ -0.58
ABCA6-206ENST00000590645 PKD2Q13563 968 aa11.38□□□□□ -0.59
ABCA6-206ENST00000590645 KLHL34Q8N239 644 aa11.35□□□□□ -0.59
ABCA6-206ENST00000590645 PLCD3Q8N3E9 789 aa11.35□□□□□ -0.59
ABCA6-206ENST00000590645 MIER1Q8N108 512 aa11.35□□□□□ -0.59
ABCA6-206ENST00000590645 FARP1Q9Y4F1 1045 aaPredicted RBP11.35□□□□□ -0.59
ABCA6-206ENST00000590645 CD44P16070 742 aaKnown RBP11.33□□□□□ -0.6
ABCA6-206ENST00000590645 SPOCK2Q92563 424 aa11.33□□□□□ -0.6
ABCA6-206ENST00000590645 CLCN6P51797 869 aa11.32□□□□□ -0.6
ABCA6-206ENST00000590645 SLC24A1O60721 1099 aa11.31□□□□□ -0.6
ABCA6-206ENST00000590645 LHX8Q68G74 356 aa11.25□□□□□ -0.61
ABCA6-206ENST00000590645 CREBZFQ9NS37 354 aa11.17□□□□□ -0.62
ABCA6-206ENST00000590645 ZNF579Q8NAF0 562 aaKnown RBP11.16□□□□□ -0.62
ABCA6-206ENST00000590645 ECM2O94769 699 aaPredicted RBP11.15□□□□□ -0.62
ABCA6-206ENST00000590645 PLEKHG5O94827 1062 aa11.14□□□□□ -0.63
ABCA6-206ENST00000590645 DCAF8L2P0C7V8 631 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms