Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MICAL2-203ENST00000379612 6625 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP3-3Q9BYR6 CSGALNACT1-203ENST00000454498 4232 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP3-3Q9BYR6 ZKSCAN1-206ENST00000620510 9192 ntTSL 5 BASIC4.7□□□□□ -1.66
KRTAP3-3Q9BYR6 LRRC37A3-211ENST00000584306 5665 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP3-3Q9BYR6 ZNF185-201ENST00000318504 4148 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
KRTAP3-3Q9BYR6 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 RBM17-205ENST00000446108 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 TMEM136-204ENST00000529187 3930 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 PHF19-214ENST00000616568 4159 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 KCNJ15-207ENST00000398934 2815 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 GLE1-201ENST00000309971 3321 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 CAMK2G-204ENST00000351293 3563 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 SEZ6-204ENST00000442608 3805 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 LINC01347-202ENST00000627498 3841 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 SLC36A3-201ENST00000335230 2456 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 ZNF252P-208ENST00000592792 2485 ntBASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 SCN4A-201ENST00000435607 7805 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 ZNF45-201ENST00000269973 3898 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 RSU1-205ENST00000602389 3639 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 SCAF8-202ENST00000367186 4908 ntTSL 2 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 ZFYVE26-207ENST00000555452 7309 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 TACC2-212ENST00000453444 9158 ntTSL 5 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 MED23-205ENST00000368068 5233 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 PRG3-201ENST00000287143 869 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 RNU6-205P-201ENST00000390858 107 ntBASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 RNU2-50P-201ENST00000410494 143 ntBASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 RNU6-1190P-201ENST00000410811 104 ntBASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 AP000344.1-203ENST00000426024 163 ntBASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 AL133553.1-201ENST00000428391 353 ntTSL 3 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 RN7SL342P-201ENST00000479616 294 ntBASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 RN7SL127P-201ENST00000494856 300 ntBASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 AP001880.2-201ENST00000538233 448 ntBASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 IGHV3OR16-15-201ENST00000565463 414 ntBASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 BOD1P2-201ENST00000578494 481 ntBASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 MIR4663-201ENST00000582039 76 ntBASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 MIR3663-201ENST00000583207 97 ntBASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 AL596092.1-201ENST00000605701 304 ntBASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 pRNA.10-201ENST00000613590 89 ntBASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 MRNIP-204ENST00000518219 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 ABCA8-201ENST00000269080 5677 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 TEX14-202ENST00000349033 4773 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 POU3F4-201ENST00000373200 3878 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 PIWIL3-205ENST00000616349 3111 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 STK36-202ENST00000392105 4821 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 CDHR3-211ENST00000478080 2633 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 TIMELESS-203ENST00000553532 5121 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 ADAMTS4-202ENST00000367996 9773 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 CEP350-202ENST00000367607 13491 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 TULP4-201ENST00000367094 5170 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 EIF5A2-201ENST00000295822 5593 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 THBS3-211ENST00000541990 2928 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 TMEM43-201ENST00000306077 3341 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 OR5BA1P-202ENST00000641215 5464 ntBASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 ITPRIPL1-201ENST00000361124 4295 ntBASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 AC022164.1-201ENST00000568767 2673 ntBASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 MED23-204ENST00000368060 4446 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 BLOC1S6-218ENST00000568816 4013 ntTSL 2 BASIC4.69□□□□□ -1.66
KRTAP3-3Q9BYR6 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 CLVS2-201ENST00000275162 11485 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 GTF3C1-202ENST00000561623 7015 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 ANAPC16-204ENST00000615507 3100 ntTSL 3 BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 SMG1P7-201ENST00000565246 2704 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 OR2AH1P-202ENST00000641232 2744 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 DSG4-201ENST00000308128 3579 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 B4GALT6-202ENST00000306851 3891 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 VPS4B-201ENST00000238497 3324 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 AL353807.3-201ENST00000500626 2505 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 TRIO-201ENST00000344135 4065 ntTSL 2 BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 SLFN11-201ENST00000308377 4910 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms