Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.05□□□□□ -1.76
SSX4O60224 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.05□□□□□ -1.76
SSX4O60224 TOMM20P2-201ENST00000540082 421 ntBASIC4.05□□□□□ -1.76
SSX4O60224 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.05□□□□□ -1.76
SSX4O60224 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.05□□□□□ -1.76
SSX4O60224 MTCYBP27-201ENST00000555160 670 ntBASIC4.05□□□□□ -1.76
SSX4O60224 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.05□□□□□ -1.76
SSX4O60224 AC009097.3-201ENST00000563557 1018 ntBASIC4.05□□□□□ -1.76
SSX4O60224 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.05□□□□□ -1.76
SSX4O60224 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSX4O60224 AC022662.1-201ENST00000580252 331 ntBASIC4.05□□□□□ -1.76
SSX4O60224 SNORA74C-1-201ENST00000580726 201 ntBASIC4.05□□□□□ -1.76
SSX4O60224 SNORD39.3-201ENST00000584451 71 ntBASIC4.05□□□□□ -1.76
SSX4O60224 AC061975.8-201ENST00000587058 721 ntBASIC4.05□□□□□ -1.76
SSX4O60224 AC008759.1-201ENST00000589783 983 ntBASIC4.05□□□□□ -1.76
SSX4O60224 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.05□□□□□ -1.76
SSX4O60224 BNIP3P26-201ENST00000600827 554 ntBASIC4.05□□□□□ -1.76
SSX4O60224 AL390838.2-201ENST00000602394 274 ntBASIC4.05□□□□□ -1.76
SSX4O60224 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.05□□□□□ -1.76
SSX4O60224 AL121932.1-201ENST00000605542 214 ntBASIC4.05□□□□□ -1.76
SSX4O60224 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.05□□□□□ -1.76
SSX4O60224 AC009159.2-201ENST00000617603 606 ntBASIC4.05□□□□□ -1.76
SSX4O60224 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.05□□□□□ -1.76
SSX4O60224 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SSX4O60224 AC026634.1-201ENST00000634369 198 ntBASIC4.05□□□□□ -1.76
SSX4O60224 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSX4O60224 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSX4O60224 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSX4O60224 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SSX4O60224 AL442639.1-201ENST00000625030 1899 ntBASIC4.05□□□□□ -1.76
SSX4O60224 ZNF876P-202ENST00000398732 1485 ntBASIC4.05□□□□□ -1.76
SSX4O60224 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSX4O60224 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
SSX4O60224 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.04□□□□□ -1.76
SSX4O60224 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SSX4O60224 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SSX4O60224 RNU5D-1-201ENST00000363299 116 ntBASIC4.04□□□□□ -1.76
SSX4O60224 Y_RNA.192-201ENST00000363977 102 ntBASIC4.04□□□□□ -1.76
SSX4O60224 RNU6-1243P-201ENST00000364028 107 ntBASIC4.04□□□□□ -1.76
SSX4O60224 Y_RNA.408-201ENST00000383987 102 ntBASIC4.04□□□□□ -1.76
SSX4O60224 SNORA70F-201ENST00000384142 135 ntBASIC4.04□□□□□ -1.76
SSX4O60224 U3.22-201ENST00000391120 215 ntBASIC4.04□□□□□ -1.76
SSX4O60224 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.04□□□□□ -1.76
SSX4O60224 RNA5SP80-201ENST00000410475 111 ntBASIC4.04□□□□□ -1.76
SSX4O60224 RNA5SP345-201ENST00000410646 108 ntBASIC4.04□□□□□ -1.76
SSX4O60224 LUZP4P1-201ENST00000415420 344 ntBASIC4.04□□□□□ -1.76
SSX4O60224 RPS24P7-201ENST00000416921 246 ntBASIC4.04□□□□□ -1.76
SSX4O60224 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX4O60224 USP9YP31-201ENST00000431405 881 ntBASIC4.04□□□□□ -1.76
SSX4O60224 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.04□□□□□ -1.76
SSX4O60224 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SSX4O60224 RPL5P24-201ENST00000463742 885 ntBASIC4.04□□□□□ -1.76
SSX4O60224 RPL37P6-202ENST00000464216 403 ntBASIC4.04□□□□□ -1.76
SSX4O60224 AC087385.1-201ENST00000475062 312 ntBASIC4.04□□□□□ -1.76
SSX4O60224 RPL23AP65-201ENST00000475608 468 ntBASIC4.04□□□□□ -1.76
SSX4O60224 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.04□□□□□ -1.76
SSX4O60224 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.04□□□□□ -1.76
SSX4O60224 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX4O60224 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SSX4O60224 AC093840.1-201ENST00000511599 336 ntBASIC4.04□□□□□ -1.76
SSX4O60224 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX4O60224 RNU1-6P-201ENST00000516290 144 ntBASIC4.04□□□□□ -1.76
SSX4O60224 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX4O60224 PTP4A1P6-201ENST00000531034 478 ntBASIC4.04□□□□□ -1.76
SSX4O60224 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX4O60224 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SSX4O60224 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX4O60224 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.04□□□□□ -1.76
SSX4O60224 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.04□□□□□ -1.76
SSX4O60224 AL132657.2-201ENST00000564417 358 ntBASIC4.04□□□□□ -1.76
SSX4O60224 AC138915.2-201ENST00000569776 97 ntBASIC4.04□□□□□ -1.76
SSX4O60224 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.04□□□□□ -1.76
SSX4O60224 GAS5-AS1-201ENST00000602767 694 ntBASIC4.04□□□□□ -1.76
SSX4O60224 AL139286.1-201ENST00000604465 483 ntBASIC4.04□□□□□ -1.76
SSX4O60224 AC092954.1-201ENST00000609121 445 ntBASIC4.04□□□□□ -1.76
SSX4O60224 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.04□□□□□ -1.76
SSX4O60224 AC008147.4-201ENST00000617570 1204 ntBASIC4.04□□□□□ -1.76
SSX4O60224 AC073348.1-201ENST00000623002 331 ntBASIC4.04□□□□□ -1.76
SSX4O60224 AP002782.1-201ENST00000623107 614 ntBASIC4.04□□□□□ -1.76
SSX4O60224 AP000843.1-201ENST00000624880 701 ntBASIC4.04□□□□□ -1.76
SSX4O60224 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.04□□□□□ -1.76
SSX4O60224 FAM157B-203ENST00000639350 358 ntBASIC4.04□□□□□ -1.76
SSX4O60224 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSX4O60224 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.04□□□□□ -1.76
SSX4O60224 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SSX4O60224 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSX4O60224 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.04□□□□□ -1.76
SSX4O60224 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SSX4O60224 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSX4O60224 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.03□□□□□ -1.76
SSX4O60224 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSX4O60224 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSX4O60224 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SSX4O60224 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.03□□□□□ -1.76
SSX4O60224 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSX4O60224 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.03□□□□□ -1.76
SSX4O60224 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.03□□□□□ -1.76
SSX4O60224 AC117529.2-201ENST00000512159 2068 ntBASIC4.03□□□□□ -1.76
SSX4O60224 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSX4O60224 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms