RNA–Protein interactions for RNA: ENST00000432775.6

CCSER1-201, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene CCSER1, Length 3,927 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-201ENST00000432775 NISCHQ9Y2I1 1504 aa8.71□□□□□ -1.02
CCSER1-201ENST00000432775 CHIC1Q5VXU3 224 aa8.38□□□□□ -1.07
CCSER1-201ENST00000432775 AEBP2Q6ZN18 517 aaPredicted RBP8.23□□□□□ -1.09
CCSER1-201ENST00000432775 PHF23Q9BUL5 403 aaPredicted RBP7.77□□□□□ -1.17
CCSER1-201ENST00000432775 SLC24A1O60721 1099 aa7.72□□□□□ -1.17
CCSER1-201ENST00000432775 EHMT2Q96KQ7 1210 aa7.71□□□□□ -1.18
CCSER1-201ENST00000432775 CCDC180Q9P1Z9 1646 aa7.69□□□□□ -1.18
CCSER1-201ENST00000432775 PLPPR3Q6T4P5 718 aa7.58□□□□□ -1.2
CCSER1-201ENST00000432775 ZCCHC6Q5VYS8 1495 aaKnown RBP7.47□□□□□ -1.21
CCSER1-201ENST00000432775 DCAF1Q9Y4B6 1507 aa7.4□□□□□ -1.22
CCSER1-201ENST00000432775 RTN4Q9NQC3 1192 aaKnown RBP7.33□□□□□ -1.24
CCSER1-201ENST00000432775 CSRNP3Q8WYN3 585 aa7.29□□□□□ -1.24
CCSER1-201ENST00000432775 KCNA4P22459 653 aa7.28□□□□□ -1.24
CCSER1-201ENST00000432775 MYO15BQ96JP2 1530 aa7.22□□□□□ -1.25
CCSER1-201ENST00000432775 PELP1Q8IZL8 1130 aaKnown RBP7.2□□□□□ -1.26
CCSER1-201ENST00000432775 ABCC9O60706 1549 aa7.09□□□□□ -1.27
CCSER1-201ENST00000432775 EIF4G1Q04637 1599 aaKnown RBP7.07□□□□□ -1.28
CCSER1-201ENST00000432775 MYT1Q01538 1121 aa7.06□□□□□ -1.28
CCSER1-201ENST00000432775 UNC13AQ9UPW8 1703 aa7.04□□□□□ -1.28
CCSER1-201ENST00000432775 ADRA2BP18089 450 aa7.02□□□□□ -1.29
CCSER1-201ENST00000432775 PRKCSHP14314 528 aaPredicted RBP6.98□□□□□ -1.29
CCSER1-201ENST00000432775 ZBTB22O15209 634 aa6.9□□□□□ -1.3
CCSER1-201ENST00000432775 HRCP23327 699 aa6.89□□□□□ -1.31
CCSER1-201ENST00000432775 NACADO15069 1562 aa6.86□□□□□ -1.31
CCSER1-201ENST00000432775 AMER1Q5JTC6 1135 aaPredicted RBP6.86□□□□□ -1.31
CCSER1-201ENST00000432775 NCBP3Q53F19 620 aaKnown RBP6.85□□□□□ -1.31
CCSER1-201ENST00000432775 RB1CC1Q8TDY2 1594 aa6.82□□□□□ -1.32
CCSER1-201ENST00000432775 SLC4A1APQ9BWU0 796 aaKnown RBP6.81□□□□□ -1.32
CCSER1-201ENST00000432775 PEG3Q9GZU2 1588 aa6.81□□□□□ -1.32
CCSER1-201ENST00000432775 BAZ1AQ9NRL2 1556 aaPredicted RBP6.8□□□□□ -1.32
CCSER1-201ENST00000432775 RSF1Q96T23 1441 aaPredicted RBP6.79□□□□□ -1.32
CCSER1-201ENST00000432775 BICRAQ9NZM4 1560 aa6.77□□□□□ -1.33
CCSER1-201ENST00000432775 SCRIBQ14160 1630 aa6.76□□□□□ -1.33
CCSER1-201ENST00000432775 WIZO95785 1651 aa6.75□□□□□ -1.33
CCSER1-201ENST00000432775 MROH2BQ7Z745 1585 aa6.73□□□□□ -1.33
CCSER1-201ENST00000432775 TTBK1Q5TCY1 1321 aaPredicted RBP6.72□□□□□ -1.33
CCSER1-201ENST00000432775 PPP6R1Q9UPN7 881 aa6.7□□□□□ -1.34
CCSER1-201ENST00000432775 SHROOM4Q9ULL8 1493 aa6.7□□□□□ -1.34
CCSER1-201ENST00000432775 SMARCA4P51532 1647 aa6.69□□□□□ -1.34
CCSER1-201ENST00000432775 TIMELESSQ9UNS1 1208 aa6.69□□□□□ -1.34
CCSER1-201ENST00000432775 DAXXQ9UER7 740 aaPredicted RBP6.68□□□□□ -1.34
CCSER1-201ENST00000432775 CECR2Q9BXF3 1484 aa6.67□□□□□ -1.34
CCSER1-201ENST00000432775 SMARCA2P51531 1590 aa6.66□□□□□ -1.34
CCSER1-201ENST00000432775 TOP2AP11388 1531 aaKnown RBP6.65□□□□□ -1.35
CCSER1-201ENST00000432775 PPARGC1BQ86YN6 1023 aaKnown RBP6.63□□□□□ -1.35
CCSER1-201ENST00000432775 PRDM2Q13029 1718 aa6.63□□□□□ -1.35
CCSER1-201ENST00000432775 SCAF1Q9H7N4 1312 aaKnown RBP6.62□□□□□ -1.35
CCSER1-201ENST00000432775 TAOK2Q9UL54 1235 aa6.59□□□□□ -1.35
CCSER1-201ENST00000432775 PCGF6Q9BYE7 350 aa6.57□□□□□ -1.36
CCSER1-201ENST00000432775 NPM3O75607 178 aaKnown RBP6.57□□□□□ -1.36
CCSER1-201ENST00000432775 BIVM-ERCC5R4GMW8 1640 aa6.55□□□□□ -1.36
CCSER1-201ENST00000432775 TULP1O00294 542 aaPredicted RBP6.51□□□□□ -1.37
CCSER1-201ENST00000432775 CCDC88BA6NC98 1476 aa6.49□□□□□ -1.37
CCSER1-201ENST00000432775 TPRNQ4KMQ1 711 aa6.48□□□□□ -1.37
CCSER1-201ENST00000432775 KIF21BO75037 1637 aa6.47□□□□□ -1.37
CCSER1-201ENST00000432775 ZEB1P37275 1124 aaPredicted RBP6.47□□□□□ -1.37
CCSER1-201ENST00000432775 SYNJ1O43426 1573 aa6.47□□□□□ -1.37
CCSER1-201ENST00000432775 PLCB2Q00722 1185 aa6.47□□□□□ -1.37
CCSER1-201ENST00000432775 WRNQ14191 1432 aaPredicted RBP eCLIP6.46□□□□□ -1.38
CCSER1-201ENST00000432775 ACIN1Q9UKV3 1341 aaKnown RBP6.44□□□□□ -1.38
CCSER1-201ENST00000432775 TOP2BQ02880 1626 aa6.44□□□□□ -1.38
CCSER1-201ENST00000432775 ABCC8Q09428 1581 aa6.43□□□□□ -1.38
CCSER1-201ENST00000432775 HMGXB3Q12766 1538 aa6.43□□□□□ -1.38
CCSER1-201ENST00000432775 SUPT5HO00267 1087 aaKnown RBP6.42□□□□□ -1.38
CCSER1-201ENST00000432775 CENPBP07199 599 aaPredicted RBP6.42□□□□□ -1.38
CCSER1-201ENST00000432775 WDR97A6NE52 1622 aa6.41□□□□□ -1.38
CCSER1-201ENST00000432775 FKBP8Q14318 412 aa6.4□□□□□ -1.38
CCSER1-201ENST00000432775 BCL11AQ9H165 835 aa6.4□□□□□ -1.39
CCSER1-201ENST00000432775 KDM2AQ9Y2K7 1162 aa6.39□□□□□ -1.39
CCSER1-201ENST00000432775 PPP4R3CPQ6ZMV5 832 aa6.38□□□□□ -1.39
CCSER1-201ENST00000432775 GTF3C3Q9Y5Q9 886 aa6.37□□□□□ -1.39
CCSER1-201ENST00000432775 ATAD2BQ9ULI0 1458 aa6.37□□□□□ -1.39
CCSER1-201ENST00000432775 FBLN2P98095 1184 aa6.36□□□□□ -1.39
CCSER1-201ENST00000432775 TRIM26Q12899 539 aaPredicted RBP6.36□□□□□ -1.39
CCSER1-201ENST00000432775 SENP3Q9H4L4 574 aaPredicted RBP6.36□□□□□ -1.39
CCSER1-201ENST00000432775 NEUROD1Q13562 356 aa6.35□□□□□ -1.39
CCSER1-201ENST00000432775 BCANQ96GW7 911 aa6.35□□□□□ -1.39
CCSER1-201ENST00000432775 ARXQ96QS3 562 aa6.35□□□□□ -1.39
CCSER1-201ENST00000432775 RUSC2Q8N2Y8 1516 aa6.35□□□□□ -1.39
CCSER1-201ENST00000432775 LRRIQ1Q96JM4 1722 aa6.35□□□□□ -1.39
CCSER1-201ENST00000432775 ERICH6Q7L0X2 663 aa6.35□□□□□ -1.39
CCSER1-201ENST00000432775 HAP1P54257 671 aaPredicted RBP6.34□□□□□ -1.39
CCSER1-201ENST00000432775 ERICH3Q5RHP9 1530 aa6.32□□□□□ -1.4
CCSER1-201ENST00000432775 NCAPD3P42695 1498 aa6.31□□□□□ -1.4
CCSER1-201ENST00000432775 LOC105371045A0A1W2PR82 267 aa6.3□□□□□ -1.4
CCSER1-201ENST00000432775 KLHL34Q8N239 644 aa6.3□□□□□ -1.4
CCSER1-201ENST00000432775 BAZ1BQ9UIG0 1483 aaKnown RBP6.3□□□□□ -1.4
CCSER1-201ENST00000432775 FAM9AQ8IZU1 332 aaPredicted RBP6.29□□□□□ -1.4
CCSER1-201ENST00000432775 CUX1P39880 1505 aa6.29□□□□□ -1.4
CCSER1-201ENST00000432775 SOGA1O94964 1423 aa6.28□□□□□ -1.4
CCSER1-201ENST00000432775 PRXQ9BXM0 1461 aa6.28□□□□□ -1.4
CCSER1-201ENST00000432775 EEA1Q15075 1411 aa6.28□□□□□ -1.4
CCSER1-201ENST00000432775 CUX2O14529 1486 aa6.27□□□□□ -1.41
CCSER1-201ENST00000432775 CFAP43Q8NDM7 1665 aa6.26□□□□□ -1.41
CCSER1-201ENST00000432775 CFTRP13569 1480 aa6.25□□□□□ -1.41
CCSER1-201ENST00000432775 TNIKQ9UKE5 1360 aa6.25□□□□□ -1.41
CCSER1-201ENST00000432775 ANP32EQ9BTT0 268 aa6.24□□□□□ -1.41
CCSER1-201ENST00000432775 APLP2Q06481 763 aa6.22□□□□□ -1.41
CCSER1-201ENST00000432775 ARAP1Q96P48 1450 aa6.22□□□□□ -1.41
CCSER1-201ENST00000432775 CTTNBP2Q8WZ74 1663 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms