RNA–Protein interactions for RNA: ENST00000409188.5

PGAP1-203, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 2 BASIC

Gene PGAP1, Length 1,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-203ENST00000409188 AEBP2Q6ZN18 517 aaPredicted RBP29.71■■■□□ 2.35
PGAP1-203ENST00000409188 CHIC1Q5VXU3 224 aa28.04■■■□□ 2.08
PGAP1-203ENST00000409188 SENP3Q9H4L4 574 aaPredicted RBP25.37■■□□□ 1.65
PGAP1-203ENST00000409188 PHF23Q9BUL5 403 aaPredicted RBP25■■□□□ 1.59
PGAP1-203ENST00000409188 FOXD1Q16676 465 aa23.72■■□□□ 1.39
PGAP1-203ENST00000409188 POTEDQ86YR6 584 aa22.57■■□□□ 1.2
PGAP1-203ENST00000409188 PLPPR3Q6T4P5 718 aa22.52■■□□□ 1.2
PGAP1-203ENST00000409188 MSH5O43196 834 aa22.34■■□□□ 1.17
PGAP1-203ENST00000409188 PIAS4Q8N2W9 510 aaPredicted RBP22.04■■□□□ 1.12
PGAP1-203ENST00000409188 PPP6R1Q9UPN7 881 aa21.93■■□□□ 1.1
PGAP1-203ENST00000409188 ADRA2BP18089 450 aa21.8■■□□□ 1.08
PGAP1-203ENST00000409188 MAPK8IP2Q13387 824 aaPredicted RBP20.13■□□□□ 0.81
PGAP1-203ENST00000409188 DMRT2Q9Y5R5 561 aa20.06■□□□□ 0.8
PGAP1-203ENST00000409188 SCAF1Q9H7N4 1312 aaKnown RBP19.87■□□□□ 0.77
PGAP1-203ENST00000409188 PPP4R3CPQ6ZMV5 832 aa19.87■□□□□ 0.77
PGAP1-203ENST00000409188 CACNB1Q02641 598 aaPredicted RBP19.44■□□□□ 0.7
PGAP1-203ENST00000409188 CNKSR2Q8WXI2 1034 aa19.33■□□□□ 0.68
PGAP1-203ENST00000409188 DCAF8L1A6NGE4 600 aa19.24■□□□□ 0.67
PGAP1-203ENST00000409188 KCNA4P22459 653 aa19.16■□□□□ 0.66
PGAP1-203ENST00000409188 HOXD11P31277 338 aaPredicted RBP19.16■□□□□ 0.66
PGAP1-203ENST00000409188 NCBP3Q53F19 620 aaKnown RBP19.09■□□□□ 0.65
PGAP1-203ENST00000409188 RNF216Q9NWF9 866 aaPredicted RBP19.06■□□□□ 0.64
PGAP1-203ENST00000409188 NPM3O75607 178 aaKnown RBP19.05■□□□□ 0.64
PGAP1-203ENST00000409188 RNF39Q9H2S5 420 aa19.05■□□□□ 0.64
PGAP1-203ENST00000409188 C1QBPQ07021 282 aaKnown RBP18.72■□□□□ 0.59
PGAP1-203ENST00000409188 DNAJC5BQ9UF47 199 aa18.59■□□□□ 0.57
PGAP1-203ENST00000409188 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.23■□□□□ 0.515e-7■□□□□ 9.5
PGAP1-203ENST00000409188 SLC4A2P04920 1241 aa18.13■□□□□ 0.49
PGAP1-203ENST00000409188 SLC4A1APQ9BWU0 796 aaKnown RBP18.06■□□□□ 0.48
PGAP1-203ENST00000409188 U3KPZ7 1027 aaPredicted RBP17.92■□□□□ 0.46
PGAP1-203ENST00000409188 ZBTB22O15209 634 aa17.76■□□□□ 0.43
PGAP1-203ENST00000409188 SPINK5Q9NQ38 1064 aaPredicted RBP17.71■□□□□ 0.43
PGAP1-203ENST00000409188 DSG3P32926 999 aa17.69■□□□□ 0.42
PGAP1-203ENST00000409188 CAPN15O75808 1086 aa17.67■□□□□ 0.42
PGAP1-203ENST00000409188 FOXD4L1Q9NU39 408 aa17.62■□□□□ 0.41
PGAP1-203ENST00000409188 POTEHQ6S545 545 aa17.59■□□□□ 0.41
PGAP1-203ENST00000409188 MYCNP04198 464 aaPredicted RBP17.5■□□□□ 0.39
PGAP1-203ENST00000409188 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.31■□□□□ 0.36
PGAP1-203ENST00000409188 HNRNPUL2Q1KMD3 747 aaKnown RBP17.31■□□□□ 0.36
PGAP1-203ENST00000409188 SAMD1Q6SPF0 538 aaPredicted RBP17.31■□□□□ 0.36
PGAP1-203ENST00000409188 CSRNP3Q8WYN3 585 aa17.3■□□□□ 0.36
PGAP1-203ENST00000409188 TRHP20396 242 aaPredicted RBP17.29■□□□□ 0.36
PGAP1-203ENST00000409188 ATF5Q9Y2D1 282 aaPredicted RBP17.25■□□□□ 0.35
PGAP1-203ENST00000409188 ABCB7O75027 752 aa17.23■□□□□ 0.35
PGAP1-203ENST00000409188 APLP2Q06481 763 aa17.23■□□□□ 0.35
PGAP1-203ENST00000409188 ZNF219Q9P2Y4 722 aaPredicted RBP17.23■□□□□ 0.35
PGAP1-203ENST00000409188 EHMT2Q96KQ7 1210 aa17.22■□□□□ 0.35
PGAP1-203ENST00000409188 ATXN8OSP0DMR3 200 aa17■□□□□ 0.31
PGAP1-203ENST00000409188 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
PGAP1-203ENST00000409188 POLA2Q14181 598 aa16.84■□□□□ 0.29
PGAP1-203ENST00000409188 CHRDL2Q6WN34 429 aa16.69■□□□□ 0.26
PGAP1-203ENST00000409188 MKRN4PQ13434 485 aaPredicted RBP16.48■□□□□ 0.23
PGAP1-203ENST00000409188 ZBTB12Q9Y330 459 aaPredicted RBP16.41■□□□□ 0.22
PGAP1-203ENST00000409188 AKT1S1Q96B36 256 aa16.39■□□□□ 0.21
PGAP1-203ENST00000409188 OSCARQ8IYS5 282 aa16.34■□□□□ 0.21
PGAP1-203ENST00000409188 SP7Q8TDD2 431 aaPredicted RBP16.28■□□□□ 0.2
PGAP1-203ENST00000409188 REM2Q8IYK8 340 aaPredicted RBP16.25■□□□□ 0.19
PGAP1-203ENST00000409188 FBLN2P98095 1184 aa16.22■□□□□ 0.19
PGAP1-203ENST00000409188 PIP4P2Q8N4L2 257 aa16.2■□□□□ 0.18
PGAP1-203ENST00000409188 PITPNM1O00562 1244 aa16.09■□□□□ 0.17
PGAP1-203ENST00000409188 SPDYE2BA6NHP3 402 aa16.04■□□□□ 0.16
PGAP1-203ENST00000409188 SPDYE6P0CI01 402 aa16.04■□□□□ 0.16
PGAP1-203ENST00000409188 SPDYE2Q495Y8 402 aa16.04■□□□□ 0.16
PGAP1-203ENST00000409188 FXR2P51116 673 aaKnown RBP eCLIP16.03■□□□□ 0.16
PGAP1-203ENST00000409188 HAX1O00165 279 aa16.01■□□□□ 0.15
PGAP1-203ENST00000409188 SSUH2Q9Y2M2 353 aa16.01■□□□□ 0.15
PGAP1-203ENST00000409188 ZNF692Q9BU19 519 aaPredicted RBP15.89■□□□□ 0.13
PGAP1-203ENST00000409188 EVX2Q03828 476 aa15.82■□□□□ 0.12
PGAP1-203ENST00000409188 SPDYE4A6NLX3 237 aa15.77■□□□□ 0.12
PGAP1-203ENST00000409188 PABPN1Q86U42 306 aaKnown RBP eCLIP15.73■□□□□ 0.11
PGAP1-203ENST00000409188 PROM2Q8N271 834 aa15.67■□□□□ 0.1
PGAP1-203ENST00000409188 PRKAR2AP13861 404 aaKnown RBP15.66■□□□□ 0.1
PGAP1-203ENST00000409188 CLEC11AQ9Y240 323 aa15.64■□□□□ 0.09
PGAP1-203ENST00000409188 SPDYE1Q8NFV5 336 aaPredicted RBP15.63■□□□□ 0.09
PGAP1-203ENST00000409188 C19orf67A6NJJ6 358 aa15.54■□□□□ 0.08
PGAP1-203ENST00000409188 FKBP8Q14318 412 aa15.53■□□□□ 0.08
PGAP1-203ENST00000409188 GABBR2O75899 941 aa15.42■□□□□ 0.06
PGAP1-203ENST00000409188 CHADLQ6NUI6 762 aa15.4■□□□□ 0.06
PGAP1-203ENST00000409188 PRR29P0C7W0 189 aa15.32■□□□□ 0.04
PGAP1-203ENST00000409188 STAG3Q9UJ98 1225 aa15.28■□□□□ 0.04
PGAP1-203ENST00000409188 LHX8Q68G74 356 aa15.27■□□□□ 0.04
PGAP1-203ENST00000409188 CREBZFQ9NS37 354 aa15.25■□□□□ 0.03
PGAP1-203ENST00000409188 MNX1P50219 401 aaPredicted RBP15.15■□□□□ 0.02
PGAP1-203ENST00000409188 CD44P16070 742 aaKnown RBP15.13■□□□□ 0.01
PGAP1-203ENST00000409188 FARP1Q9Y4F1 1045 aaPredicted RBP15.12■□□□□ 0.01
PGAP1-203ENST00000409188 POTEIP0CG38 1075 aa15.11■□□□□ 0.01
PGAP1-203ENST00000409188 CLCN6P51797 869 aa15□□□□□ -0.01
PGAP1-203ENST00000409188 FBXO3Q9UK99 471 aa14.92□□□□□ -0.02
PGAP1-203ENST00000409188 VASPP50552 380 aaPredicted RBP14.89□□□□□ -0.03
PGAP1-203ENST00000409188 MIER1Q8N108 512 aa14.89□□□□□ -0.03
PGAP1-203ENST00000409188 DCBLD2Q96PD2 775 aa14.89□□□□□ -0.03
PGAP1-203ENST00000409188 ZNF579Q8NAF0 562 aaKnown RBP14.88□□□□□ -0.03
PGAP1-203ENST00000409188 ZRANB1Q9UGI0 708 aa14.85□□□□□ -0.03
PGAP1-203ENST00000409188 PLCD3Q8N3E9 789 aa14.82□□□□□ -0.04
PGAP1-203ENST00000409188 NPM1P06748 294 aaKnown RBP eCLIP14.75□□□□□ -0.05
PGAP1-203ENST00000409188 RASEFQ8IZ41 740 aa14.75□□□□□ -0.05
PGAP1-203ENST00000409188 GALR2O43603 387 aaPredicted RBP14.74□□□□□ -0.05
PGAP1-203ENST00000409188 NUBP1P53384 320 aa14.74□□□□□ -0.05
PGAP1-203ENST00000409188 IFNLR1Q8IU57 520 aaPredicted RBP14.73□□□□□ -0.05
PGAP1-203ENST00000409188 PLEKHG5O94827 1062 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms