Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 RPS20P1-201ENST00000434853 354 ntBASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 GEMIN8P3-201ENST00000445417 720 ntBASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 HMGB1P48-201ENST00000446155 598 ntBASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 HMGB1P16-201ENST00000447155 540 ntBASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 AC010469.1-201ENST00000463864 576 ntBASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 AC012158.1-204ENST00000483430 465 ntBASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 AC013356.1-201ENST00000489027 564 ntBASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 RPL30P11-201ENST00000495304 339 ntBASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 DYNLL1P6-201ENST00000503440 264 ntBASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 AC091435.1-201ENST00000505442 584 ntBASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 AC109471.1-201ENST00000511631 612 ntBASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 AC084783.1-201ENST00000565846 910 ntBASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 AC135628.1-201ENST00000568867 534 ntBASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 MTCYBP33-201ENST00000575007 1130 ntBASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 AC091178.1-203ENST00000584586 279 ntBASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 SLC25A36P1-201ENST00000590111 465 ntBASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 AL158042.1-201ENST00000605338 460 ntBASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 AC080013.3-201ENST00000606839 578 ntBASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 AL133243.1-201ENST00000614487 366 ntBASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
NCKIPSDQ9NZQ3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 RNU6-707P-201ENST00000364647 95 ntBASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 RNU6-1151P-201ENST00000384684 107 ntBASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 PRRC2CP1-201ENST00000404428 159 ntBASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 RPL7P53-201ENST00000421245 739 ntBASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 RPL21P91-201ENST00000429231 479 ntBASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 USP9YP28-201ENST00000435142 589 ntBASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 RPL7P59-201ENST00000447700 943 ntBASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 AC010683.1-201ENST00000473673 378 ntBASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 AP003973.1-201ENST00000604639 691 ntBASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 AC015813.4-201ENST00000610469 179 ntBASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 MIR6716-201ENST00000613413 80 ntBASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 AL157770.1-201ENST00000623049 439 ntBASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 U3.53-201ENST00000628922 216 ntBASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 MIR6830-201ENST00000636015 70 ntBASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms