RNA–Protein interactions for RNA: ENST00000604639.1

AP003973.1-201, humanhuman

BASIC

Gene AP003973.1, Length 691 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003973.1-201ENST00000604639 AEBP2Q6ZN18 517 aaPredicted RBP28.92■■■□□ 2.22
AP003973.1-201ENST00000604639 CHIC1Q5VXU3 224 aa27.29■■□□□ 1.96
AP003973.1-201ENST00000604639 SENP3Q9H4L4 574 aaPredicted RBP24.81■■□□□ 1.56
AP003973.1-201ENST00000604639 PHF23Q9BUL5 403 aaPredicted RBP24.41■■□□□ 1.5
AP003973.1-201ENST00000604639 FOXD1Q16676 465 aa23.09■■□□□ 1.29
AP003973.1-201ENST00000604639 MSH5O43196 834 aa21.78■■□□□ 1.08
AP003973.1-201ENST00000604639 PLPPR3Q6T4P5 718 aa21.72■■□□□ 1.07
AP003973.1-201ENST00000604639 POTEDQ86YR6 584 aa21.61■■□□□ 1.05
AP003973.1-201ENST00000604639 PIAS4Q8N2W9 510 aaPredicted RBP21.51■■□□□ 1.03
AP003973.1-201ENST00000604639 PPP6R1Q9UPN7 881 aa21.36■■□□□ 1.01
AP003973.1-201ENST00000604639 ADRA2BP18089 450 aa21.27■■□□□ 1
AP003973.1-201ENST00000604639 DMRT2Q9Y5R5 561 aa19.62■□□□□ 0.73
AP003973.1-201ENST00000604639 SCAF1Q9H7N4 1312 aaKnown RBP19.6■□□□□ 0.73
AP003973.1-201ENST00000604639 MAPK8IP2Q13387 824 aaPredicted RBP19.6■□□□□ 0.73
AP003973.1-201ENST00000604639 PPP4R3CPQ6ZMV5 832 aa18.97■□□□□ 0.63
AP003973.1-201ENST00000604639 HOXD11P31277 338 aaPredicted RBP18.82■□□□□ 0.6
AP003973.1-201ENST00000604639 CACNB1Q02641 598 aaPredicted RBP18.79■□□□□ 0.6
AP003973.1-201ENST00000604639 DCAF8L1A6NGE4 600 aa18.74■□□□□ 0.59
AP003973.1-201ENST00000604639 CNKSR2Q8WXI2 1034 aa18.71■□□□□ 0.59
AP003973.1-201ENST00000604639 RNF216Q9NWF9 866 aaPredicted RBP18.61■□□□□ 0.57
AP003973.1-201ENST00000604639 RNF39Q9H2S5 420 aa18.53■□□□□ 0.56
AP003973.1-201ENST00000604639 DNAJC5BQ9UF47 199 aa18.32■□□□□ 0.52
AP003973.1-201ENST00000604639 C1QBPQ07021 282 aaKnown RBP18.29■□□□□ 0.52
AP003973.1-201ENST00000604639 NCBP3Q53F19 620 aaKnown RBP18.22■□□□□ 0.51
AP003973.1-201ENST00000604639 NPM3O75607 178 aaKnown RBP17.88■□□□□ 0.45
AP003973.1-201ENST00000604639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.88■□□□□ 0.45
AP003973.1-201ENST00000604639 U3KPZ7 1027 aaPredicted RBP17.47■□□□□ 0.39
AP003973.1-201ENST00000604639 KCNA4P22459 653 aa17.29■□□□□ 0.36
AP003973.1-201ENST00000604639 CAPN15O75808 1086 aa17.26■□□□□ 0.35
AP003973.1-201ENST00000604639 DSG3P32926 999 aa17.25■□□□□ 0.35
AP003973.1-201ENST00000604639 SPINK5Q9NQ38 1064 aaPredicted RBP17.25■□□□□ 0.35
AP003973.1-201ENST00000604639 SLC4A2P04920 1241 aa17.14■□□□□ 0.33
AP003973.1-201ENST00000604639 APLP2Q06481 763 aa17.07■□□□□ 0.32
AP003973.1-201ENST00000604639 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.99■□□□□ 0.31
AP003973.1-201ENST00000604639 HNRNPUL2Q1KMD3 747 aaKnown RBP16.99■□□□□ 0.31
AP003973.1-201ENST00000604639 ZNF219Q9P2Y4 722 aaPredicted RBP16.96■□□□□ 0.31
AP003973.1-201ENST00000604639 TRHP20396 242 aaPredicted RBP16.92■□□□□ 0.3
AP003973.1-201ENST00000604639 POTEHQ6S545 545 aa16.9■□□□□ 0.3
AP003973.1-201ENST00000604639 SAMD1Q6SPF0 538 aaPredicted RBP16.85■□□□□ 0.29
AP003973.1-201ENST00000604639 ABCB7O75027 752 aa16.8■□□□□ 0.28
AP003973.1-201ENST00000604639 MYCNP04198 464 aaPredicted RBP16.59■□□□□ 0.25
AP003973.1-201ENST00000604639 RBM42Q9BTD8 480 aaKnown RBP16.54■□□□□ 0.24
AP003973.1-201ENST00000604639 POLA2Q14181 598 aa16.43■□□□□ 0.22
AP003973.1-201ENST00000604639 SLC4A1APQ9BWU0 796 aaKnown RBP16.3■□□□□ 0.2
AP003973.1-201ENST00000604639 FOXD4L1Q9NU39 408 aa16.27■□□□□ 0.2
AP003973.1-201ENST00000604639 CHRDL2Q6WN34 429 aa16.21■□□□□ 0.19
AP003973.1-201ENST00000604639 ZBTB12Q9Y330 459 aaPredicted RBP16.17■□□□□ 0.18
AP003973.1-201ENST00000604639 ATF5Q9Y2D1 282 aaPredicted RBP16.14■□□□□ 0.17
AP003973.1-201ENST00000604639 AKT1S1Q96B36 256 aa16.08■□□□□ 0.16
AP003973.1-201ENST00000604639 REM2Q8IYK8 340 aaPredicted RBP15.88■□□□□ 0.13
AP003973.1-201ENST00000604639 OSCARQ8IYS5 282 aa15.88■□□□□ 0.13
AP003973.1-201ENST00000604639 ZBTB22O15209 634 aa15.86■□□□□ 0.13
AP003973.1-201ENST00000604639 ATXN8OSP0DMR3 200 aa15.86■□□□□ 0.13
AP003973.1-201ENST00000604639 PIP4P2Q8N4L2 257 aa15.76■□□□□ 0.11
AP003973.1-201ENST00000604639 SP7Q8TDD2 431 aaPredicted RBP15.74■□□□□ 0.11
AP003973.1-201ENST00000604639 PITPNM1O00562 1244 aa15.7■□□□□ 0.1
AP003973.1-201ENST00000604639 FXR2P51116 673 aaKnown RBP eCLIP15.66■□□□□ 0.1
AP003973.1-201ENST00000604639 SPDYE2BA6NHP3 402 aa15.62■□□□□ 0.09
AP003973.1-201ENST00000604639 SPDYE6P0CI01 402 aa15.62■□□□□ 0.09
AP003973.1-201ENST00000604639 FBLN2P98095 1184 aa15.62■□□□□ 0.09
AP003973.1-201ENST00000604639 SPDYE2Q495Y8 402 aa15.62■□□□□ 0.09
AP003973.1-201ENST00000604639 HAX1O00165 279 aa15.54■□□□□ 0.08
AP003973.1-201ENST00000604639 MKRN4PQ13434 485 aaPredicted RBP15.41■□□□□ 0.06
AP003973.1-201ENST00000604639 SPDYE1Q8NFV5 336 aaPredicted RBP15.4■□□□□ 0.06
AP003973.1-201ENST00000604639 SSUH2Q9Y2M2 353 aa15.36■□□□□ 0.05
AP003973.1-201ENST00000604639 ZNF692Q9BU19 519 aaPredicted RBP15.35■□□□□ 0.05
AP003973.1-201ENST00000604639 CLEC11AQ9Y240 323 aa15.32■□□□□ 0.04
AP003973.1-201ENST00000604639 PRKAR2AP13861 404 aaKnown RBP15.3■□□□□ 0.04
AP003973.1-201ENST00000604639 EVX2Q03828 476 aa15.28■□□□□ 0.04
AP003973.1-201ENST00000604639 C19orf67A6NJJ6 358 aa15.16■□□□□ 0.02
AP003973.1-201ENST00000604639 PABPN1Q86U42 306 aaKnown RBP eCLIP15.09■□□□□ 0.01
AP003973.1-201ENST00000604639 PRR29P0C7W0 189 aa15.08■□□□□ 0
AP003973.1-201ENST00000604639 CHADLQ6NUI6 762 aa15.02■□□□□ -0
AP003973.1-201ENST00000604639 GABBR2O75899 941 aa14.98□□□□□ -0.01
AP003973.1-201ENST00000604639 CSRNP3Q8WYN3 585 aa14.94□□□□□ -0.02
AP003973.1-201ENST00000604639 FARP1Q9Y4F1 1045 aaPredicted RBP14.84□□□□□ -0.03
AP003973.1-201ENST00000604639 CLCN6P51797 869 aa14.81□□□□□ -0.04
AP003973.1-201ENST00000604639 CD44P16070 742 aaKnown RBP14.79□□□□□ -0.04
AP003973.1-201ENST00000604639 LHX8Q68G74 356 aa14.75□□□□□ -0.05
AP003973.1-201ENST00000604639 STAG3Q9UJ98 1225 aa14.73□□□□□ -0.05
AP003973.1-201ENST00000604639 POTEIP0CG38 1075 aa14.63□□□□□ -0.07
AP003973.1-201ENST00000604639 CREBZFQ9NS37 354 aa14.62□□□□□ -0.07
AP003973.1-201ENST00000604639 ZNF579Q8NAF0 562 aaKnown RBP14.59□□□□□ -0.07
AP003973.1-201ENST00000604639 SPDYE4A6NLX3 237 aa14.58□□□□□ -0.08
AP003973.1-201ENST00000604639 ZRANB1Q9UGI0 708 aa14.55□□□□□ -0.08
AP003973.1-201ENST00000604639 EHMT2Q96KQ7 1210 aa14.54□□□□□ -0.08
AP003973.1-201ENST00000604639 DCBLD2Q96PD2 775 aa14.54□□□□□ -0.08
AP003973.1-201ENST00000604639 PAK3O75914 559 aaPredicted RBP14.43□□□□□ -0.1
AP003973.1-201ENST00000604639 NPM1P06748 294 aaKnown RBP eCLIP14.4□□□□□ -0.1
AP003973.1-201ENST00000604639 GALR2O43603 387 aaPredicted RBP14.37□□□□□ -0.11
AP003973.1-201ENST00000604639 MNX1P50219 401 aaPredicted RBP14.35□□□□□ -0.11
AP003973.1-201ENST00000604639 PHF12Q96QT6 1004 aa14.28□□□□□ -0.12
AP003973.1-201ENST00000604639 PROM2Q8N271 834 aa14.24□□□□□ -0.13
AP003973.1-201ENST00000604639 OTUD5Q96G74 571 aa14.16□□□□□ -0.14
AP003973.1-201ENST00000604639 POTEB2H3BUK9 544 aa14.13□□□□□ -0.15
AP003973.1-201ENST00000604639 ASTLQ6HA08 431 aaPredicted RBP14.12□□□□□ -0.15
AP003973.1-201ENST00000604639 PELP1Q8IZL8 1130 aaKnown RBP14.11□□□□□ -0.15
AP003973.1-201ENST00000604639 MS4A3Q96HJ5 214 aa14.1□□□□□ -0.15
AP003973.1-201ENST00000604639 ATMINO43313 823 aaPredicted RBP14.06□□□□□ -0.16
AP003973.1-201ENST00000604639 C7P10643 843 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms