Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 ASCC3-204ENST00000369162 8146 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 EPHA5-205ENST00000613740 8355 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 PCNT-201ENST00000359568 10560 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 METTL21EP-201ENST00000298105 713 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 NACAP2-201ENST00000318548 624 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 RNU6-116P-201ENST00000384042 109 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 RNU6-820P-201ENST00000384273 107 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 RNU6-1081P-201ENST00000384537 107 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 RNU6-1154P-201ENST00000391001 104 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 RN7SKP97-201ENST00000410966 333 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 HIGD1AP4-201ENST00000430194 280 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 MRPL48P1-201ENST00000445390 636 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 AC114982.1-201ENST00000469402 321 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 AC022447.1-201ENST00000515358 464 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 SNORA40.9-201ENST00000515895 93 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 SNORA31.11-201ENST00000516528 139 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 MIR2116-201ENST00000517221 80 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 MIR4311-201ENST00000580794 100 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 AC008782.1-201ENST00000603386 430 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 AC018690.1-201ENST00000608144 626 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 MIR6852-201ENST00000621699 66 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 UBA3-213ENST00000631029 123 ntTSL 5 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 MIR3974-201ENST00000637126 96 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 MEG3-220ENST00000522771 6984 ntTSL 5 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 MMAA-201ENST00000281317 7068 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 LRRC37A9P-201ENST00000603850 5376 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 SCN10A-201ENST00000449082 6418 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 SYNJ2-207ENST00000638626 7332 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 COL4A6-203ENST00000394872 6750 ntTSL 5 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 SYNJ1-202ENST00000382491 6958 ntTSL 5 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 UBXN8-202ENST00000341403 1202 ntTSL 3 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 Y_RNA.401-201ENST00000383965 117 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 MIR183-201ENST00000384958 110 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 ARL5AP3-201ENST00000439327 386 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 GAPDHP14-201ENST00000450472 937 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 MRPL42P4-201ENST00000453267 443 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 RNU6-1132P-201ENST00000459214 107 ntBASIC1.63□□□□□ -2.15
HMCN1Q96RW7 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms