RNA–Protein interactions for RNA: ENST00000412996.1

AC004870.3-202, humanhuman

TSL 3 BASIC

Gene AC004870.3, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004870.3-202ENST00000412996 AEBP2Q6ZN18 517 aaPredicted RBP29.7■■■□□ 2.35
AC004870.3-202ENST00000412996 CHIC1Q5VXU3 224 aa28.32■■■□□ 2.12
AC004870.3-202ENST00000412996 SENP3Q9H4L4 574 aaPredicted RBP25.28■■□□□ 1.64
AC004870.3-202ENST00000412996 PHF23Q9BUL5 403 aaPredicted RBP25.01■■□□□ 1.59
AC004870.3-202ENST00000412996 FOXD1Q16676 465 aa23.58■■□□□ 1.37
AC004870.3-202ENST00000412996 PLPPR3Q6T4P5 718 aa22.69■■□□□ 1.22
AC004870.3-202ENST00000412996 PPP6R1Q9UPN7 881 aa22.18■■□□□ 1.14
AC004870.3-202ENST00000412996 ADRA2BP18089 450 aa22.12■■□□□ 1.13
AC004870.3-202ENST00000412996 PIAS4Q8N2W9 510 aaPredicted RBP22.06■■□□□ 1.12
AC004870.3-202ENST00000412996 MSH5O43196 834 aa21.97■■□□□ 1.11
AC004870.3-202ENST00000412996 POTEDQ86YR6 584 aa21.23■□□□□ 0.99
AC004870.3-202ENST00000412996 MAPK8IP2Q13387 824 aaPredicted RBP20.28■□□□□ 0.84
AC004870.3-202ENST00000412996 SCAF1Q9H7N4 1312 aaKnown RBP20.2■□□□□ 0.82
AC004870.3-202ENST00000412996 DMRT2Q9Y5R5 561 aa20.07■□□□□ 0.8
AC004870.3-202ENST00000412996 PPP4R3CPQ6ZMV5 832 aa19.93■□□□□ 0.78
AC004870.3-202ENST00000412996 CNKSR2Q8WXI2 1034 aa19.5■□□□□ 0.71
AC004870.3-202ENST00000412996 HOXD11P31277 338 aaPredicted RBP19.39■□□□□ 0.69
AC004870.3-202ENST00000412996 DCAF8L1A6NGE4 600 aa19.29■□□□□ 0.68
AC004870.3-202ENST00000412996 RNF216Q9NWF9 866 aaPredicted RBP19.28■□□□□ 0.68
AC004870.3-202ENST00000412996 NCBP3Q53F19 620 aaKnown RBP19.18■□□□□ 0.66
AC004870.3-202ENST00000412996 NPM3O75607 178 aaKnown RBP18.93■□□□□ 0.62
AC004870.3-202ENST00000412996 CACNB1Q02641 598 aaPredicted RBP18.8■□□□□ 0.6
AC004870.3-202ENST00000412996 RNF39Q9H2S5 420 aa18.77■□□□□ 0.6
AC004870.3-202ENST00000412996 KCNA4P22459 653 aa18.71■□□□□ 0.59
AC004870.3-202ENST00000412996 DNAJC5BQ9UF47 199 aa18.65■□□□□ 0.58
AC004870.3-202ENST00000412996 C1QBPQ07021 282 aaKnown RBP18.5■□□□□ 0.55
AC004870.3-202ENST00000412996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.5■□□□□ 0.55
AC004870.3-202ENST00000412996 U3KPZ7 1027 aaPredicted RBP18.12■□□□□ 0.49
AC004870.3-202ENST00000412996 SLC4A2P04920 1241 aa18.04■□□□□ 0.48
AC004870.3-202ENST00000412996 SPINK5Q9NQ38 1064 aaPredicted RBP17.84■□□□□ 0.45
AC004870.3-202ENST00000412996 CAPN15O75808 1086 aa17.79■□□□□ 0.44
AC004870.3-202ENST00000412996 SLC4A1APQ9BWU0 796 aaKnown RBP17.67■□□□□ 0.42
AC004870.3-202ENST00000412996 DSG3P32926 999 aa17.64■□□□□ 0.41
AC004870.3-202ENST00000412996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.62■□□□□ 0.41
AC004870.3-202ENST00000412996 HNRNPUL2Q1KMD3 747 aaKnown RBP17.62■□□□□ 0.41
AC004870.3-202ENST00000412996 APLP2Q06481 763 aa17.59■□□□□ 0.41
AC004870.3-202ENST00000412996 TRHP20396 242 aaPredicted RBP17.55■□□□□ 0.4
AC004870.3-202ENST00000412996 SAMD1Q6SPF0 538 aaPredicted RBP17.53■□□□□ 0.4
AC004870.3-202ENST00000412996 MYCNP04198 464 aaPredicted RBP17.48■□□□□ 0.39
AC004870.3-202ENST00000412996 ZNF219Q9P2Y4 722 aaPredicted RBP17.47■□□□□ 0.39
AC004870.3-202ENST00000412996 ABCB7O75027 752 aa17.4■□□□□ 0.38
AC004870.3-202ENST00000412996 FOXD4L1Q9NU39 408 aa17.38■□□□□ 0.37
AC004870.3-202ENST00000412996 ZBTB22O15209 634 aa17.2■□□□□ 0.34
AC004870.3-202ENST00000412996 POLA2Q14181 598 aa17.11■□□□□ 0.33
AC004870.3-202ENST00000412996 ATF5Q9Y2D1 282 aaPredicted RBP17.11■□□□□ 0.33
AC004870.3-202ENST00000412996 ATXN8OSP0DMR3 200 aa16.81■□□□□ 0.28
AC004870.3-202ENST00000412996 RBM42Q9BTD8 480 aaKnown RBP16.8■□□□□ 0.28
AC004870.3-202ENST00000412996 ZBTB12Q9Y330 459 aaPredicted RBP16.72■□□□□ 0.27
AC004870.3-202ENST00000412996 POTEHQ6S545 545 aa16.67■□□□□ 0.26
AC004870.3-202ENST00000412996 OSCARQ8IYS5 282 aa16.54■□□□□ 0.24
AC004870.3-202ENST00000412996 CSRNP3Q8WYN3 585 aa16.54■□□□□ 0.24
AC004870.3-202ENST00000412996 AKT1S1Q96B36 256 aa16.46■□□□□ 0.23
AC004870.3-202ENST00000412996 EHMT2Q96KQ7 1210 aa16.41■□□□□ 0.22
AC004870.3-202ENST00000412996 FBLN2P98095 1184 aa16.4■□□□□ 0.22
AC004870.3-202ENST00000412996 CHRDL2Q6WN34 429 aa16.4■□□□□ 0.22
AC004870.3-202ENST00000412996 MKRN4PQ13434 485 aaPredicted RBP16.32■□□□□ 0.2
AC004870.3-202ENST00000412996 REM2Q8IYK8 340 aaPredicted RBP16.32■□□□□ 0.2
AC004870.3-202ENST00000412996 SPDYE2BA6NHP3 402 aa16.23■□□□□ 0.19
AC004870.3-202ENST00000412996 SPDYE6P0CI01 402 aa16.23■□□□□ 0.19
AC004870.3-202ENST00000412996 SPDYE2Q495Y8 402 aa16.23■□□□□ 0.19
AC004870.3-202ENST00000412996 PITPNM1O00562 1244 aa16.14■□□□□ 0.17
AC004870.3-202ENST00000412996 ZNF692Q9BU19 519 aaPredicted RBP16.09■□□□□ 0.17
AC004870.3-202ENST00000412996 PIP4P2Q8N4L2 257 aa16.05■□□□□ 0.16
AC004870.3-202ENST00000412996 SSUH2Q9Y2M2 353 aa16.03■□□□□ 0.16
AC004870.3-202ENST00000412996 FXR2P51116 673 aaKnown RBP eCLIP15.97■□□□□ 0.15
AC004870.3-202ENST00000412996 CLEC11AQ9Y240 323 aa15.93■□□□□ 0.14
AC004870.3-202ENST00000412996 SPDYE1Q8NFV5 336 aaPredicted RBP15.92■□□□□ 0.14
AC004870.3-202ENST00000412996 PABPN1Q86U42 306 aaKnown RBP eCLIP15.86■□□□□ 0.13
AC004870.3-202ENST00000412996 HAX1O00165 279 aa15.74■□□□□ 0.11
AC004870.3-202ENST00000412996 PRKAR2AP13861 404 aaKnown RBP15.74■□□□□ 0.11
AC004870.3-202ENST00000412996 SP7Q8TDD2 431 aaPredicted RBP15.68■□□□□ 0.1
AC004870.3-202ENST00000412996 PRR29P0C7W0 189 aa15.67■□□□□ 0.1
AC004870.3-202ENST00000412996 SPDYE4A6NLX3 237 aa15.62■□□□□ 0.09
AC004870.3-202ENST00000412996 CHADLQ6NUI6 762 aa15.61■□□□□ 0.09
AC004870.3-202ENST00000412996 EVX2Q03828 476 aa15.57■□□□□ 0.08
AC004870.3-202ENST00000412996 C19orf67A6NJJ6 358 aa15.45■□□□□ 0.06
AC004870.3-202ENST00000412996 STAG3Q9UJ98 1225 aa15.43■□□□□ 0.06
AC004870.3-202ENST00000412996 FARP1Q9Y4F1 1045 aaPredicted RBP15.37■□□□□ 0.05
AC004870.3-202ENST00000412996 CREBZFQ9NS37 354 aa15.31■□□□□ 0.04
AC004870.3-202ENST00000412996 CD44P16070 742 aaKnown RBP15.24■□□□□ 0.03
AC004870.3-202ENST00000412996 PROM2Q8N271 834 aa15.22■□□□□ 0.03
AC004870.3-202ENST00000412996 GABBR2O75899 941 aa15.2■□□□□ 0.02
AC004870.3-202ENST00000412996 MNX1P50219 401 aaPredicted RBP15.06■□□□□ 0
AC004870.3-202ENST00000412996 ZRANB1Q9UGI0 708 aa15.06■□□□□ 0
AC004870.3-202ENST00000412996 NPM1P06748 294 aaKnown RBP eCLIP15.02■□□□□ -0
AC004870.3-202ENST00000412996 FKBP8Q14318 412 aa15□□□□□ -0.01
AC004870.3-202ENST00000412996 ZNF579Q8NAF0 562 aaKnown RBP14.99□□□□□ -0.01
AC004870.3-202ENST00000412996 CLCN6P51797 869 aa14.96□□□□□ -0.01
AC004870.3-202ENST00000412996 PAK3O75914 559 aaPredicted RBP14.94□□□□□ -0.02
AC004870.3-202ENST00000412996 MIER1Q8N108 512 aa14.9□□□□□ -0.02
AC004870.3-202ENST00000412996 POTEIP0CG38 1075 aa14.89□□□□□ -0.03
AC004870.3-202ENST00000412996 PHF12Q96QT6 1004 aa14.87□□□□□ -0.03
AC004870.3-202ENST00000412996 PLEKHG5O94827 1062 aa14.84□□□□□ -0.03
AC004870.3-202ENST00000412996 GALR2O43603 387 aaPredicted RBP14.83□□□□□ -0.04
AC004870.3-202ENST00000412996 DCBLD2Q96PD2 775 aa14.82□□□□□ -0.04
AC004870.3-202ENST00000412996 PLCD3Q8N3E9 789 aa14.79□□□□□ -0.04
AC004870.3-202ENST00000412996 TSPYL2Q9H2G4 693 aaPredicted RBP14.79□□□□□ -0.04
AC004870.3-202ENST00000412996 LHX8Q68G74 356 aa14.73□□□□□ -0.05
AC004870.3-202ENST00000412996 RASEFQ8IZ41 740 aa14.68□□□□□ -0.06
AC004870.3-202ENST00000412996 CCDC61Q9Y6R9 512 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms