RNA–Protein interactions for RNA: ENST00000515895.1

SNORA40.9-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 93 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.9-201ENST00000515895 AEBP2Q6ZN18 517 aaPredicted RBP14.75□□□□□ -0.05
SNORA40.9-201ENST00000515895 CHIC1Q5VXU3 224 aa14.05□□□□□ -0.16
SNORA40.9-201ENST00000515895 SENP3Q9H4L4 574 aaPredicted RBP12.5□□□□□ -0.41
SNORA40.9-201ENST00000515895 PHF23Q9BUL5 403 aaPredicted RBP12.38□□□□□ -0.43
SNORA40.9-201ENST00000515895 FOXD1Q16676 465 aa11.69□□□□□ -0.54
SNORA40.9-201ENST00000515895 PLPPR3Q6T4P5 718 aa11.25□□□□□ -0.61
SNORA40.9-201ENST00000515895 PPP6R1Q9UPN7 881 aa11.02□□□□□ -0.65
SNORA40.9-201ENST00000515895 ADRA2BP18089 450 aa10.99□□□□□ -0.65
SNORA40.9-201ENST00000515895 PIAS4Q8N2W9 510 aaPredicted RBP10.94□□□□□ -0.66
SNORA40.9-201ENST00000515895 MSH5O43196 834 aa10.85□□□□□ -0.67
SNORA40.9-201ENST00000515895 POTEDQ86YR6 584 aa10.49□□□□□ -0.73
SNORA40.9-201ENST00000515895 MAPK8IP2Q13387 824 aaPredicted RBP10.09□□□□□ -0.79
SNORA40.9-201ENST00000515895 SCAF1Q9H7N4 1312 aaKnown RBP9.96□□□□□ -0.82
SNORA40.9-201ENST00000515895 DMRT2Q9Y5R5 561 aa9.94□□□□□ -0.82
SNORA40.9-201ENST00000515895 PPP4R3CPQ6ZMV5 832 aa9.9□□□□□ -0.82
SNORA40.9-201ENST00000515895 CNKSR2Q8WXI2 1034 aa9.66□□□□□ -0.86
SNORA40.9-201ENST00000515895 HOXD11P31277 338 aaPredicted RBP9.6□□□□□ -0.87
SNORA40.9-201ENST00000515895 DCAF8L1A6NGE4 600 aa9.58□□□□□ -0.88
SNORA40.9-201ENST00000515895 RNF216Q9NWF9 866 aaPredicted RBP9.55□□□□□ -0.88
SNORA40.9-201ENST00000515895 NCBP3Q53F19 620 aaKnown RBP9.5□□□□□ -0.89
SNORA40.9-201ENST00000515895 NPM3O75607 178 aaKnown RBP9.42□□□□□ -0.9
SNORA40.9-201ENST00000515895 KCNA4P22459 653 aa9.34□□□□□ -0.91
SNORA40.9-201ENST00000515895 CACNB1Q02641 598 aaPredicted RBP9.29□□□□□ -0.92
SNORA40.9-201ENST00000515895 RNF39Q9H2S5 420 aa9.29□□□□□ -0.92
SNORA40.9-201ENST00000515895 DNAJC5BQ9UF47 199 aa9.18□□□□□ -0.94
SNORA40.9-201ENST00000515895 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.17□□□□□ -0.94
SNORA40.9-201ENST00000515895 C1QBPQ07021 282 aaKnown RBP9.12□□□□□ -0.95
SNORA40.9-201ENST00000515895 U3KPZ7 1027 aaPredicted RBP9□□□□□ -0.97
SNORA40.9-201ENST00000515895 SLC4A2P04920 1241 aa8.98□□□□□ -0.97
SNORA40.9-201ENST00000515895 SPINK5Q9NQ38 1064 aaPredicted RBP8.87□□□□□ -0.99
SNORA40.9-201ENST00000515895 CAPN15O75808 1086 aa8.83□□□□□ -1
SNORA40.9-201ENST00000515895 SLC4A1APQ9BWU0 796 aaKnown RBP8.81□□□□□ -1
SNORA40.9-201ENST00000515895 DSG3P32926 999 aa8.74□□□□□ -1.01
SNORA40.9-201ENST00000515895 TRHP20396 242 aaPredicted RBP8.72□□□□□ -1.01
SNORA40.9-201ENST00000515895 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.7□□□□□ -1.02
SNORA40.9-201ENST00000515895 HNRNPUL2Q1KMD3 747 aaKnown RBP8.7□□□□□ -1.02
SNORA40.9-201ENST00000515895 MYCNP04198 464 aaPredicted RBP8.68□□□□□ -1.02
SNORA40.9-201ENST00000515895 SAMD1Q6SPF0 538 aaPredicted RBP8.68□□□□□ -1.02
SNORA40.9-201ENST00000515895 ABCB7O75027 752 aa8.67□□□□□ -1.02
SNORA40.9-201ENST00000515895 APLP2Q06481 763 aa8.67□□□□□ -1.02
SNORA40.9-201ENST00000515895 FOXD4L1Q9NU39 408 aa8.65□□□□□ -1.02
SNORA40.9-201ENST00000515895 ZNF219Q9P2Y4 722 aaPredicted RBP8.65□□□□□ -1.02
SNORA40.9-201ENST00000515895 ZBTB22O15209 634 aa8.62□□□□□ -1.03
SNORA40.9-201ENST00000515895 ATF5Q9Y2D1 282 aaPredicted RBP8.54□□□□□ -1.04
SNORA40.9-201ENST00000515895 POLA2Q14181 598 aa8.49□□□□□ -1.05
SNORA40.9-201ENST00000515895 ATXN8OSP0DMR3 200 aa8.33□□□□□ -1.08
SNORA40.9-201ENST00000515895 RBM42Q9BTD8 480 aaKnown RBP8.29□□□□□ -1.08
SNORA40.9-201ENST00000515895 CSRNP3Q8WYN3 585 aa8.27□□□□□ -1.09
SNORA40.9-201ENST00000515895 EHMT2Q96KQ7 1210 aa8.26□□□□□ -1.09
SNORA40.9-201ENST00000515895 ZBTB12Q9Y330 459 aaPredicted RBP8.26□□□□□ -1.09
SNORA40.9-201ENST00000515895 OSCARQ8IYS5 282 aa8.24□□□□□ -1.09
SNORA40.9-201ENST00000515895 POTEHQ6S545 545 aa8.23□□□□□ -1.09
SNORA40.9-201ENST00000515895 MKRN4PQ13434 485 aaPredicted RBP8.14□□□□□ -1.11
SNORA40.9-201ENST00000515895 FBLN2P98095 1184 aa8.13□□□□□ -1.11
SNORA40.9-201ENST00000515895 AKT1S1Q96B36 256 aa8.13□□□□□ -1.11
SNORA40.9-201ENST00000515895 CHRDL2Q6WN34 429 aa8.11□□□□□ -1.11
SNORA40.9-201ENST00000515895 REM2Q8IYK8 340 aaPredicted RBP8.08□□□□□ -1.12
SNORA40.9-201ENST00000515895 SPDYE2BA6NHP3 402 aa8.04□□□□□ -1.12
SNORA40.9-201ENST00000515895 SPDYE6P0CI01 402 aa8.04□□□□□ -1.12
SNORA40.9-201ENST00000515895 SPDYE2Q495Y8 402 aa8.04□□□□□ -1.12
SNORA40.9-201ENST00000515895 PITPNM1O00562 1244 aa8.02□□□□□ -1.13
SNORA40.9-201ENST00000515895 ZNF692Q9BU19 519 aaPredicted RBP7.98□□□□□ -1.13
SNORA40.9-201ENST00000515895 SSUH2Q9Y2M2 353 aa7.96□□□□□ -1.14
SNORA40.9-201ENST00000515895 PIP4P2Q8N4L2 257 aa7.95□□□□□ -1.14
SNORA40.9-201ENST00000515895 CLEC11AQ9Y240 323 aa7.92□□□□□ -1.14
SNORA40.9-201ENST00000515895 FXR2P51116 673 aaKnown RBP eCLIP7.9□□□□□ -1.14
SNORA40.9-201ENST00000515895 PABPN1Q86U42 306 aaKnown RBP eCLIP7.88□□□□□ -1.15
SNORA40.9-201ENST00000515895 SPDYE1Q8NFV5 336 aaPredicted RBP7.88□□□□□ -1.15
SNORA40.9-201ENST00000515895 PRKAR2AP13861 404 aaKnown RBP7.81□□□□□ -1.16
SNORA40.9-201ENST00000515895 HAX1O00165 279 aa7.78□□□□□ -1.16
SNORA40.9-201ENST00000515895 CHADLQ6NUI6 762 aa7.78□□□□□ -1.16
SNORA40.9-201ENST00000515895 SPDYE4A6NLX3 237 aa7.77□□□□□ -1.17
SNORA40.9-201ENST00000515895 PRR29P0C7W0 189 aa7.76□□□□□ -1.17
SNORA40.9-201ENST00000515895 SP7Q8TDD2 431 aaPredicted RBP7.74□□□□□ -1.17
SNORA40.9-201ENST00000515895 EVX2Q03828 476 aa7.73□□□□□ -1.17
SNORA40.9-201ENST00000515895 C19orf67A6NJJ6 358 aa7.65□□□□□ -1.18
SNORA40.9-201ENST00000515895 STAG3Q9UJ98 1225 aa7.62□□□□□ -1.19
SNORA40.9-201ENST00000515895 FARP1Q9Y4F1 1045 aaPredicted RBP7.62□□□□□ -1.19
SNORA40.9-201ENST00000515895 CREBZFQ9NS37 354 aa7.61□□□□□ -1.19
SNORA40.9-201ENST00000515895 PROM2Q8N271 834 aa7.57□□□□□ -1.2
SNORA40.9-201ENST00000515895 CD44P16070 742 aaKnown RBP7.56□□□□□ -1.2
SNORA40.9-201ENST00000515895 GABBR2O75899 941 aa7.52□□□□□ -1.21
SNORA40.9-201ENST00000515895 FKBP8Q14318 412 aa7.51□□□□□ -1.21
SNORA40.9-201ENST00000515895 MNX1P50219 401 aaPredicted RBP7.49□□□□□ -1.21
SNORA40.9-201ENST00000515895 ZRANB1Q9UGI0 708 aa7.47□□□□□ -1.21
SNORA40.9-201ENST00000515895 NPM1P06748 294 aaKnown RBP eCLIP7.43□□□□□ -1.22
SNORA40.9-201ENST00000515895 ZNF579Q8NAF0 562 aaKnown RBP7.42□□□□□ -1.22
SNORA40.9-201ENST00000515895 PHF12Q96QT6 1004 aa7.41□□□□□ -1.22
SNORA40.9-201ENST00000515895 MIER1Q8N108 512 aa7.4□□□□□ -1.22
SNORA40.9-201ENST00000515895 PAK3O75914 559 aaPredicted RBP7.39□□□□□ -1.23
SNORA40.9-201ENST00000515895 POTEIP0CG38 1075 aa7.39□□□□□ -1.23
SNORA40.9-201ENST00000515895 GALR2O43603 387 aaPredicted RBP7.37□□□□□ -1.23
SNORA40.9-201ENST00000515895 PLCD3Q8N3E9 789 aa7.36□□□□□ -1.23
SNORA40.9-201ENST00000515895 TSPYL2Q9H2G4 693 aaPredicted RBP7.36□□□□□ -1.23
SNORA40.9-201ENST00000515895 PLEKHG5O94827 1062 aa7.34□□□□□ -1.23
SNORA40.9-201ENST00000515895 CLCN6P51797 869 aa7.34□□□□□ -1.23
SNORA40.9-201ENST00000515895 RASEFQ8IZ41 740 aa7.32□□□□□ -1.24
SNORA40.9-201ENST00000515895 DCBLD2Q96PD2 775 aa7.32□□□□□ -1.24
SNORA40.9-201ENST00000515895 MS4A3Q96HJ5 214 aa7.3□□□□□ -1.24
SNORA40.9-201ENST00000515895 CCDC61Q9Y6R9 512 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms