Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC064847.1-201ENST00000403125 506 ntBASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 DDX11L5-201ENST00000421620 654 ntBASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 AC008753.1-201ENST00000423096 284 ntBASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 RN7SL854P-201ENST00000459767 295 ntBASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 AC119424.1-201ENST00000472513 350 ntTSL 5 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 HMGN2P9-201ENST00000476875 229 ntBASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 TPI1P4-201ENST00000513630 473 ntBASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 SNORA25.13-201ENST00000516395 103 ntBASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 RNU6-70P-201ENST00000516438 60 ntBASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 RNU6-557P-201ENST00000516842 110 ntBASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 AC022679.1-201ENST00000522559 496 ntTSL 2 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 AC109635.2-201ENST00000525654 524 ntTSL 3 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 TINF2-210ENST00000559019 885 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 MIR4519-201ENST00000579767 58 ntBASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 AC145207.7-201ENST00000580125 958 ntBASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 AC116447.1-201ENST00000613153 453 ntBASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 MIR4726-201ENST00000615971 58 ntBASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 DPCD-206ENST00000626968 541 ntTSL 5 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 MYLK-205ENST00000360772 10027 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 CCDC15-203ENST00000529051 3924 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 MRPL19-202ENST00000393909 3479 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 SCN5A-203ENST00000413689 8504 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 RSPO2-203ENST00000517939 2487 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 RRP12-203ENST00000414986 4242 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 SIK2-201ENST00000304987 9678 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 HK1-206ENST00000448642 3868 ntTSL 5 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 ZWILCH-201ENST00000307897 3960 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 AZIN1-202ENST00000347770 2857 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 DEPDC5-204ENST00000400246 5551 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 EDNRB-201ENST00000334286 4277 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 RP1-206ENST00000636932 3649 ntTSL 5 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 NWD1-204ENST00000524140 7641 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 ZNF2-202ENST00000611463 3737 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 TACC2-228ENST00000515273 9245 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 SYNPO2-201ENST00000307142 7295 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 TNIK-211ENST00000475336 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 GJA5-202ENST00000579774 3181 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 ZFP30-202ENST00000392144 3916 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 ZNF561-201ENST00000302851 4693 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 ZNF35-201ENST00000296092 2503 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 ASPA-201ENST00000263080 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 THUMPD1-202ENST00000396083 2624 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 LTBP1-204ENST00000407925 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 LINC00838-201ENST00000562956 2936 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 SZT2-209ENST00000562955 13968 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 ZNF41-201ENST00000313116 4297 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 DEPDC5-201ENST00000382111 5212 ntTSL 5 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 ACACB-202ENST00000377848 9247 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 ZFYVE1-208ENST00000556143 4485 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 TECPR2-201ENST00000359520 8686 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 BEND3-202ENST00000429433 6654 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 NLRP1-203ENST00000345221 4656 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 NLRP1-217ENST00000619223 4698 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 DDX46-202ENST00000452510 5689 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 FAM13A-212ENST00000508369 3169 ntTSL 5 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 DAB2-201ENST00000320816 4534 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 CACNA1E-205ENST00000367570 9724 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 RBM25-205ENST00000527432 3375 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 BTN2A2-202ENST00000356709 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 ANKRD20A5P-201ENST00000431648 3556 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 PARM1-201ENST00000307428 5011 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 DDX50P1-201ENST00000438163 2400 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 PIK3C2B-202ENST00000367187 7686 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 SLC25A53-202ENST00000594199 6225 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 SLC2A12-201ENST00000275230 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 EIF4G2-232ENST00000640650 2724 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 URM1-202ENST00000372850 3045 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 SLC39A9-201ENST00000031146 5192 ntTSL 5 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 SEZ6L2-201ENST00000308713 3801 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 MIRLET7A1-201ENST00000362295 80 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 RNU6-624P-201ENST00000363411 107 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 SNORA51.4-201ENST00000364993 124 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 SNORA71E-201ENST00000365032 132 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 RYR2-202ENST00000366574 16562 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 RNU6-540P-201ENST00000384622 101 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms