RNA–Protein interactions for RNA: ENST00000400246.5

DEPDC5-204, Transcript of DEP domain containing 5, humanhuman

TSL 1 (best) BASIC

Gene DEPDC5, Length 5,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-204ENST00000400246 NISCHQ9Y2I1 1504 aa17.36■□□□□ 0.37
DEPDC5-204ENST00000400246 SHROOM4Q9ULL8 1493 aa16.11■□□□□ 0.17
DEPDC5-204ENST00000400246 DCAF8L2P0C7V8 631 aa16.11■□□□□ 0.17
DEPDC5-204ENST00000400246 SUPT5HO00267 1087 aaKnown RBP16.06■□□□□ 0.16
DEPDC5-204ENST00000400246 PCGF6Q9BYE7 350 aa15.6■□□□□ 0.09
DEPDC5-204ENST00000400246 PPARGC1BQ86YN6 1023 aaKnown RBP15.47■□□□□ 0.07
DEPDC5-204ENST00000400246 HRCP23327 699 aa15.44■□□□□ 0.06
DEPDC5-204ENST00000400246 CHIC1Q5VXU3 224 aa15.28■□□□□ 0.04
DEPDC5-204ENST00000400246 EHMT2Q96KQ7 1210 aa15.21■□□□□ 0.03
DEPDC5-204ENST00000400246 LOC105371045A0A1W2PR82 267 aa15.2■□□□□ 0.02
DEPDC5-204ENST00000400246 MYO15BQ96JP2 1530 aa15.12■□□□□ 0.01
DEPDC5-204ENST00000400246 FAM9AQ8IZU1 332 aaPredicted RBP15□□□□□ -0.01
DEPDC5-204ENST00000400246 TRIM26Q12899 539 aaPredicted RBP14.83□□□□□ -0.03
DEPDC5-204ENST00000400246 TTBK1Q5TCY1 1321 aaPredicted RBP14.74□□□□□ -0.05
DEPDC5-204ENST00000400246 TRIM41Q8WV44 630 aa14.68□□□□□ -0.06
DEPDC5-204ENST00000400246 ZCCHC6Q5VYS8 1495 aaKnown RBP14.63□□□□□ -0.07
DEPDC5-204ENST00000400246 ZEB1P37275 1124 aaPredicted RBP14.58□□□□□ -0.07
DEPDC5-204ENST00000400246 SCAF1Q9H7N4 1312 aaKnown RBP14.58□□□□□ -0.08
DEPDC5-204ENST00000400246 DCAF1Q9Y4B6 1507 aa14.54□□□□□ -0.08
DEPDC5-204ENST00000400246 APLP2Q06481 763 aa14.54□□□□□ -0.08
DEPDC5-204ENST00000400246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.53□□□□□ -0.08
DEPDC5-204ENST00000400246 PELP1Q8IZL8 1130 aaKnown RBP14.52□□□□□ -0.08
DEPDC5-204ENST00000400246 CCER1Q8TC90 406 aaPredicted RBP14.52□□□□□ -0.08
DEPDC5-204ENST00000400246 YTHDC1Q96MU7 727 aaKnown RBP14.41□□□□□ -0.1
DEPDC5-204ENST00000400246 NEUROD1Q13562 356 aa14.34□□□□□ -0.11
DEPDC5-204ENST00000400246 GTF3C3Q9Y5Q9 886 aa14.34□□□□□ -0.11
DEPDC5-204ENST00000400246 CENPBP07199 599 aaPredicted RBP14.29□□□□□ -0.12
DEPDC5-204ENST00000400246 DIEXFQ68CQ4 756 aaKnown RBP14.28□□□□□ -0.12
DEPDC5-204ENST00000400246 ACIN1Q9UKV3 1341 aaKnown RBP14.28□□□□□ -0.12
DEPDC5-204ENST00000400246 CCDC180Q9P1Z9 1646 aa14.24□□□□□ -0.13
DEPDC5-204ENST00000400246 ABCC9O60706 1549 aa14.21□□□□□ -0.14
DEPDC5-204ENST00000400246 RANGAP1P46060 587 aaPredicted RBP14.18□□□□□ -0.14
DEPDC5-204ENST00000400246 UBTFP17480 764 aaKnown RBP14.11□□□□□ -0.15
DEPDC5-204ENST00000400246 ATP1B4Q9UN42 357 aaPredicted RBP14.09□□□□□ -0.15
DEPDC5-204ENST00000400246 HNRNPUL2Q1KMD3 747 aaKnown RBP14.09□□□□□ -0.15
DEPDC5-204ENST00000400246 RSF1Q96T23 1441 aaPredicted RBP14.06□□□□□ -0.16
DEPDC5-204ENST00000400246 SCRIBQ14160 1630 aa14.02□□□□□ -0.17
DEPDC5-204ENST00000400246 RB1CC1Q8TDY2 1594 aa13.95□□□□□ -0.18
DEPDC5-204ENST00000400246 ZNF316A6NFI3 1004 aaPredicted RBP13.94□□□□□ -0.18
DEPDC5-204ENST00000400246 MIER1Q8N108 512 aa13.92□□□□□ -0.18
DEPDC5-204ENST00000400246 MYT1LQ9UL68 1186 aa13.89□□□□□ -0.19
DEPDC5-204ENST00000400246 CECR2Q9BXF3 1484 aa13.83□□□□□ -0.2
DEPDC5-204ENST00000400246 MYT1Q01538 1121 aa13.83□□□□□ -0.2
DEPDC5-204ENST00000400246 PABPN1Q86U42 306 aaKnown RBP eCLIP13.78□□□□□ -0.2
DEPDC5-204ENST00000400246 ITGAEP38570 1179 aa13.76□□□□□ -0.21
DEPDC5-204ENST00000400246 ERICH6Q7L0X2 663 aa13.75□□□□□ -0.21
DEPDC5-204ENST00000400246 CSRNP3Q8WYN3 585 aa13.74□□□□□ -0.21
DEPDC5-204ENST00000400246 BCANQ96GW7 911 aa13.73□□□□□ -0.21
DEPDC5-204ENST00000400246 CEP162Q5TB80 1403 aa13.71□□□□□ -0.22
DEPDC5-204ENST00000400246 MROH2BQ7Z745 1585 aa13.68□□□□□ -0.22
DEPDC5-204ENST00000400246 SOGA1O94964 1423 aa13.66□□□□□ -0.22
DEPDC5-204ENST00000400246 ABCC8Q09428 1581 aa13.63□□□□□ -0.23
DEPDC5-204ENST00000400246 CCDC88BA6NC98 1476 aa13.62□□□□□ -0.23
DEPDC5-204ENST00000400246 WIZO95785 1651 aa13.59□□□□□ -0.23
DEPDC5-204ENST00000400246 NACADO15069 1562 aa13.58□□□□□ -0.24
DEPDC5-204ENST00000400246 RUSC2Q8N2Y8 1516 aa13.55□□□□□ -0.24
DEPDC5-204ENST00000400246 SUPT16HQ9Y5B9 1047 aaKnown RBP13.53□□□□□ -0.24
DEPDC5-204ENST00000400246 NEFLP07196 543 aa13.52□□□□□ -0.24
DEPDC5-204ENST00000400246 TNIKQ9UKE5 1360 aa13.51□□□□□ -0.25
DEPDC5-204ENST00000400246 KCNH8Q96L42 1107 aa13.47□□□□□ -0.25
DEPDC5-204ENST00000400246 HIRIP3Q9BW71 556 aaPredicted RBP13.47□□□□□ -0.25
DEPDC5-204ENST00000400246 FKBP8Q14318 412 aa13.45□□□□□ -0.26
DEPDC5-204ENST00000400246 POLR3GLQ9BT43 218 aa13.44□□□□□ -0.26
DEPDC5-204ENST00000400246 CLIP1P30622 1438 aa13.44□□□□□ -0.26
DEPDC5-204ENST00000400246 DDX10Q13206 875 aaKnown RBP13.42□□□□□ -0.26
DEPDC5-204ENST00000400246 SLC4A1APQ9BWU0 796 aaKnown RBP13.42□□□□□ -0.26
DEPDC5-204ENST00000400246 WRNQ14191 1432 aaPredicted RBP eCLIP13.42□□□□□ -0.269e-6■■■■■ 50.1
DEPDC5-204ENST00000400246 TRIM52Q96A61 297 aa13.4□□□□□ -0.26
DEPDC5-204ENST00000400246 TSHZ2Q9NRE2 1034 aa13.4□□□□□ -0.26
DEPDC5-204ENST00000400246 GOLGA3Q08378 1498 aa13.39□□□□□ -0.27
DEPDC5-204ENST00000400246 KANK4Q5T7N3 995 aaPredicted RBP13.34□□□□□ -0.27
DEPDC5-204ENST00000400246 FAM50AQ14320 339 aaKnown RBP13.34□□□□□ -0.27
DEPDC5-204ENST00000400246 ANP32EQ9BTT0 268 aa13.33□□□□□ -0.28
DEPDC5-204ENST00000400246 DAXXQ9UER7 740 aaPredicted RBP13.32□□□□□ -0.28
DEPDC5-204ENST00000400246 CNGB1Q14028 1251 aaPredicted RBP13.32□□□□□ -0.28
DEPDC5-204ENST00000400246 IRX6P78412 446 aaPredicted RBP13.3□□□□□ -0.28
DEPDC5-204ENST00000400246 BAZ1AQ9NRL2 1556 aaPredicted RBP13.29□□□□□ -0.28
DEPDC5-204ENST00000400246 P3H3Q8IVL6 736 aa13.29□□□□□ -0.28
DEPDC5-204ENST00000400246 SIN3AQ96ST3 1273 aa13.28□□□□□ -0.28
DEPDC5-204ENST00000400246 EEA1Q15075 1411 aa13.27□□□□□ -0.29
DEPDC5-204ENST00000400246 VPS8Q8N3P4 1428 aa13.25□□□□□ -0.29
DEPDC5-204ENST00000400246 BCL11AQ9H165 835 aa13.24□□□□□ -0.29
DEPDC5-204ENST00000400246 DHX57Q6P158 1386 aaKnown RBP13.24□□□□□ -0.29
DEPDC5-204ENST00000400246 CEP164Q9UPV0 1460 aa13.24□□□□□ -0.29
DEPDC5-204ENST00000400246 RAPGEF2Q9Y4G8 1499 aa13.22□□□□□ -0.29
DEPDC5-204ENST00000400246 ANP32CO43423 234 aa13.2□□□□□ -0.3
DEPDC5-204ENST00000400246 CLSPNQ9HAW4 1339 aa13.2□□□□□ -0.3
DEPDC5-204ENST00000400246 TOP2AP11388 1531 aaKnown RBP13.18□□□□□ -0.3
DEPDC5-204ENST00000400246 RBM19Q9Y4C8 960 aaKnown RBP13.18□□□□□ -0.3
DEPDC5-204ENST00000400246 SMARCA2P51531 1590 aa13.17□□□□□ -0.3
DEPDC5-204ENST00000400246 HNRNPUQ00839 825 aaKnown RBP eCLIP13.14□□□□□ -0.31
DEPDC5-204ENST00000400246 SENP3-EIF4A1A0A087X0R7 540 aa13.13□□□□□ -0.31
DEPDC5-204ENST00000400246 FBLN2P98095 1184 aa13.1□□□□□ -0.31
DEPDC5-204ENST00000400246 CCNB3Q8WWL7 1395 aa13.08□□□□□ -0.31
DEPDC5-204ENST00000400246 SMARCA4P51532 1647 aa13.08□□□□□ -0.32
DEPDC5-204ENST00000400246 CDK11AQ9UQ88 783 aaPredicted RBP13.07□□□□□ -0.32
DEPDC5-204ENST00000400246 RAB3GAP2Q9H2M9 1393 aa13.07□□□□□ -0.32
DEPDC5-204ENST00000400246 EIF4G1Q04637 1599 aaKnown RBP13.06□□□□□ -0.32
DEPDC5-204ENST00000400246 SLC24A1O60721 1099 aa13.05□□□□□ -0.32
DEPDC5-204ENST00000400246 BAZ1BQ9UIG0 1483 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms