Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PCDHGB6Q9Y5F9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHGB6Q9Y5F9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB6Q9Y5F9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB6Q9Y5F9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PCDHGB6Q9Y5F9 TSPY7P-201ENST00000431358 1114 ntBASIC18.23■□□□□ 0.51
PCDHGB6Q9Y5F9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB6Q9Y5F9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB6Q9Y5F9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGB6Q9Y5F9 BX088651.1-201ENST00000540551 451 ntBASIC18.23■□□□□ 0.51
PCDHGB6Q9Y5F9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.23■□□□□ 0.51
PCDHGB6Q9Y5F9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGB6Q9Y5F9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGB6Q9Y5F9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHGB6Q9Y5F9 AC004264.1-201ENST00000608354 794 ntBASIC18.23■□□□□ 0.51
PCDHGB6Q9Y5F9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGB6Q9Y5F9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB6Q9Y5F9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB6Q9Y5F9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB6Q9Y5F9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGB6Q9Y5F9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGB6Q9Y5F9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB6Q9Y5F9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGB6Q9Y5F9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB6Q9Y5F9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGB6Q9Y5F9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGB6Q9Y5F9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGB6Q9Y5F9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGB6Q9Y5F9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PCDHGB6Q9Y5F9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGB6Q9Y5F9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PCDHGB6Q9Y5F9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB6Q9Y5F9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGB6Q9Y5F9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB6Q9Y5F9 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB6Q9Y5F9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 AF186192.3-201ENST00000583427 947 ntBASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 LINC01023-201ENST00000606054 436 ntBASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 BX119927.1-201ENST00000636596 1552 ntBASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGB6Q9Y5F9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
PCDHGB6Q9Y5F9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 AL353708.3-201ENST00000610272 989 ntBASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 NEFHP1-201ENST00000412845 2629 ntBASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 KRT8P17-201ENST00000453110 1448 ntBASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 HTR7P1-201ENST00000538670 1336 ntBASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB6Q9Y5F9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB6Q9Y5F9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB6Q9Y5F9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PCDHGB6Q9Y5F9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHGB6Q9Y5F9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB6Q9Y5F9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB6Q9Y5F9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB6Q9Y5F9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB6Q9Y5F9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB6Q9Y5F9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB6Q9Y5F9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms