Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 NUDT16P1-203ENST00000513809 620 ntBASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 NAPSB-206ENST00000562112 1266 ntBASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 AP000525.1-201ENST00000608286 694 ntBASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB9Q9Y5E1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB9Q9Y5E1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 NIFKP9-201ENST00000419265 221 ntBASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHB9Q9Y5E1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB9Q9Y5E1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB9Q9Y5E1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHB9Q9Y5E1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB9Q9Y5E1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB9Q9Y5E1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PCDHB9Q9Y5E1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB9Q9Y5E1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB9Q9Y5E1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHB9Q9Y5E1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB9Q9Y5E1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB9Q9Y5E1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB9Q9Y5E1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHB9Q9Y5E1 REXO1L10P-201ENST00000615707 1290 ntBASIC19.59■□□□□ 0.73
PCDHB9Q9Y5E1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB9Q9Y5E1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB9Q9Y5E1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PCDHB9Q9Y5E1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PCDHB9Q9Y5E1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHB9Q9Y5E1 AC079598.2-202ENST00000546624 1451 ntBASIC19.59■□□□□ 0.73
PCDHB9Q9Y5E1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB9Q9Y5E1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
PCDHB9Q9Y5E1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB9Q9Y5E1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB9Q9Y5E1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.58■□□□□ 0.73
PCDHB9Q9Y5E1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB9Q9Y5E1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB9Q9Y5E1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDHB9Q9Y5E1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDHB9Q9Y5E1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
PCDHB9Q9Y5E1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms