Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PKP3Q9Y446 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKP3Q9Y446 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PKP3Q9Y446 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.38■□□□□ 0.69
PKP3Q9Y446 AP002982.1-201ENST00000492365 877 ntBASIC19.38■□□□□ 0.69
PKP3Q9Y446 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PKP3Q9Y446 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.38■□□□□ 0.69
PKP3Q9Y446 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKP3Q9Y446 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.38■□□□□ 0.69
PKP3Q9Y446 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PKP3Q9Y446 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.38■□□□□ 0.69
PKP3Q9Y446 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.38■□□□□ 0.69
PKP3Q9Y446 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.38■□□□□ 0.69
PKP3Q9Y446 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKP3Q9Y446 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.38■□□□□ 0.69
PKP3Q9Y446 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKP3Q9Y446 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.37■□□□□ 0.69
PKP3Q9Y446 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PKP3Q9Y446 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.37■□□□□ 0.69
PKP3Q9Y446 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.37■□□□□ 0.69
PKP3Q9Y446 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PKP3Q9Y446 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PKP3Q9Y446 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PKP3Q9Y446 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
PKP3Q9Y446 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PKP3Q9Y446 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.37■□□□□ 0.69
PKP3Q9Y446 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.37■□□□□ 0.69
PKP3Q9Y446 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.37■□□□□ 0.69
PKP3Q9Y446 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PKP3Q9Y446 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PKP3Q9Y446 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PKP3Q9Y446 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PKP3Q9Y446 RARRES2P10-201ENST00000564312 460 ntBASIC19.37■□□□□ 0.69
PKP3Q9Y446 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.37■□□□□ 0.69
PKP3Q9Y446 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.37■□□□□ 0.69
PKP3Q9Y446 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
PKP3Q9Y446 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PKP3Q9Y446 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.37■□□□□ 0.69
PKP3Q9Y446 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PKP3Q9Y446 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PKP3Q9Y446 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PKP3Q9Y446 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.36■□□□□ 0.69
PKP3Q9Y446 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PKP3Q9Y446 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PKP3Q9Y446 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PKP3Q9Y446 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PKP3Q9Y446 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PKP3Q9Y446 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PKP3Q9Y446 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
PKP3Q9Y446 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
PKP3Q9Y446 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.36■□□□□ 0.69
PKP3Q9Y446 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.36■□□□□ 0.69
PKP3Q9Y446 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.36■□□□□ 0.69
PKP3Q9Y446 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PKP3Q9Y446 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PKP3Q9Y446 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.36■□□□□ 0.69
PKP3Q9Y446 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PKP3Q9Y446 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PKP3Q9Y446 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.36■□□□□ 0.69
PKP3Q9Y446 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.36■□□□□ 0.69
PKP3Q9Y446 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PKP3Q9Y446 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.36■□□□□ 0.69
PKP3Q9Y446 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PKP3Q9Y446 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.36■□□□□ 0.69
PKP3Q9Y446 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PKP3Q9Y446 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PKP3Q9Y446 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PKP3Q9Y446 AC116562.4-201ENST00000641316 2276 ntBASIC19.36■□□□□ 0.69
PKP3Q9Y446 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PKP3Q9Y446 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PKP3Q9Y446 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.36■□□□□ 0.69
PKP3Q9Y446 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PKP3Q9Y446 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PKP3Q9Y446 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.35■□□□□ 0.69
PKP3Q9Y446 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PKP3Q9Y446 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
PKP3Q9Y446 AL135905.2-201ENST00000584934 1404 ntBASIC19.35■□□□□ 0.69
PKP3Q9Y446 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PKP3Q9Y446 Z82202.1-201ENST00000623446 1880 ntBASIC19.35■□□□□ 0.69
PKP3Q9Y446 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PKP3Q9Y446 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.35■□□□□ 0.69
PKP3Q9Y446 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PKP3Q9Y446 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.35■□□□□ 0.69
PKP3Q9Y446 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PKP3Q9Y446 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PKP3Q9Y446 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PKP3Q9Y446 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.35■□□□□ 0.69
PKP3Q9Y446 HLA-A-209ENST00000638375 975 ntBASIC19.35■□□□□ 0.69
PKP3Q9Y446 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.35■□□□□ 0.69
PKP3Q9Y446 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.35■□□□□ 0.69
PKP3Q9Y446 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PKP3Q9Y446 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
PKP3Q9Y446 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PKP3Q9Y446 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PKP3Q9Y446 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
PKP3Q9Y446 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PKP3Q9Y446 AC104417.2-201ENST00000562989 1793 ntBASIC19.34■□□□□ 0.69
PKP3Q9Y446 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PKP3Q9Y446 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.34■□□□□ 0.69
PKP3Q9Y446 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms