Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 AC133552.2-202ENST00000575694 574 ntBASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRPS28Q9Y2Q9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRPS28Q9Y2Q9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
MRPS28Q9Y2Q9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.61■□□□□ 0.25
MRPS28Q9Y2Q9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRPS28Q9Y2Q9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MRPS28Q9Y2Q9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.61■□□□□ 0.25
MRPS28Q9Y2Q9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRPS28Q9Y2Q9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.61■□□□□ 0.25
MRPS28Q9Y2Q9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRPS28Q9Y2Q9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.61■□□□□ 0.25
MRPS28Q9Y2Q9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MRPS28Q9Y2Q9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRPS28Q9Y2Q9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRPS28Q9Y2Q9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.61■□□□□ 0.25
MRPS28Q9Y2Q9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MRPS28Q9Y2Q9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
MRPS28Q9Y2Q9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
MRPS28Q9Y2Q9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRPS28Q9Y2Q9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRPS28Q9Y2Q9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 BX276092.2-201ENST00000417668 665 ntBASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MRPS28Q9Y2Q9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 AC073210.2-201ENST00000430369 194 ntBASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 AL162430.1-201ENST00000480705 870 ntBASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 AC105036.2-201ENST00000569468 176 ntBASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 AC005829.2-201ENST00000571422 1056 ntBASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPS28Q9Y2Q9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
MRPS28Q9Y2Q9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
MRPS28Q9Y2Q9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
MRPS28Q9Y2Q9 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms