Protein–RNA interactions for Protein: Q9UBU9

NXF1, Nuclear RNA export factor 1, humanhuman

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1Q9UBU9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.76■□□□□ 0.91
NXF1Q9UBU9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.76■□□□□ 0.91
NXF1Q9UBU9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NXF1Q9UBU9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
NXF1Q9UBU9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.76■□□□□ 0.91
NXF1Q9UBU9 AC131212.4-201ENST00000623606 975 ntBASIC20.76■□□□□ 0.91
NXF1Q9UBU9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NXF1Q9UBU9 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NXF1Q9UBU9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.76■□□□□ 0.91
NXF1Q9UBU9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
NXF1Q9UBU9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NXF1Q9UBU9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NXF1Q9UBU9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.76■□□□□ 0.91
NXF1Q9UBU9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NXF1Q9UBU9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.76■□□□□ 0.91
NXF1Q9UBU9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 AC004980.1-204ENST00000429707 299 ntBASIC20.75■□□□□ 0.91
NXF1Q9UBU9 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.75■□□□□ 0.91
NXF1Q9UBU9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 AL160286.2-201ENST00000567150 934 ntBASIC20.75■□□□□ 0.91
NXF1Q9UBU9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.75■□□□□ 0.91
NXF1Q9UBU9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 AC007952.6-201ENST00000573168 2673 ntBASIC20.75■□□□□ 0.91
NXF1Q9UBU9 AC003957.1-201ENST00000625108 2673 ntBASIC20.75■□□□□ 0.91
NXF1Q9UBU9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.75■□□□□ 0.91
NXF1Q9UBU9 AC104417.2-201ENST00000562989 1793 ntBASIC20.74■□□□□ 0.91
NXF1Q9UBU9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NXF1Q9UBU9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NXF1Q9UBU9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
NXF1Q9UBU9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NXF1Q9UBU9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NXF1Q9UBU9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.74■□□□□ 0.91
NXF1Q9UBU9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NXF1Q9UBU9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.74■□□□□ 0.91
NXF1Q9UBU9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NXF1Q9UBU9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NXF1Q9UBU9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NXF1Q9UBU9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NXF1Q9UBU9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
NXF1Q9UBU9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.74■□□□□ 0.91
NXF1Q9UBU9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.74■□□□□ 0.91
NXF1Q9UBU9 MIR4497-201ENST00000583208 89 ntBASIC20.74■□□□□ 0.91
NXF1Q9UBU9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.74■□□□□ 0.91
NXF1Q9UBU9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
NXF1Q9UBU9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.74■□□□□ 0.91
NXF1Q9UBU9 AL031985.4-201ENST00000642138 673 ntBASIC20.74■□□□□ 0.91
NXF1Q9UBU9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NXF1Q9UBU9 Z82202.1-201ENST00000623446 1880 ntBASIC20.73■□□□□ 0.91
NXF1Q9UBU9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.73■□□□□ 0.91
NXF1Q9UBU9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.73■□□□□ 0.91
NXF1Q9UBU9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
NXF1Q9UBU9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NXF1Q9UBU9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NXF1Q9UBU9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NXF1Q9UBU9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.73■□□□□ 0.91
NXF1Q9UBU9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NXF1Q9UBU9 AL355355.2-201ENST00000442321 338 ntBASIC20.73■□□□□ 0.91
NXF1Q9UBU9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.73■□□□□ 0.91
NXF1Q9UBU9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.73■□□□□ 0.91
NXF1Q9UBU9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NXF1Q9UBU9 AC026471.5-201ENST00000615068 467 ntBASIC20.73■□□□□ 0.91
NXF1Q9UBU9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NXF1Q9UBU9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NXF1Q9UBU9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NXF1Q9UBU9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
NXF1Q9UBU9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NXF1Q9UBU9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.73■□□□□ 0.91
NXF1Q9UBU9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NXF1Q9UBU9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NXF1Q9UBU9 SDHAP1-207ENST00000440850 2000 ntBASIC20.72■□□□□ 0.91
NXF1Q9UBU9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.72■□□□□ 0.91
NXF1Q9UBU9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
NXF1Q9UBU9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NXF1Q9UBU9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.72■□□□□ 0.91
NXF1Q9UBU9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.72■□□□□ 0.91
NXF1Q9UBU9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.72■□□□□ 0.91
NXF1Q9UBU9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NXF1Q9UBU9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NXF1Q9UBU9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms