Protein–RNA interactions for Protein: Q9NYF3

FAM53C, Protein FAM53C, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53CQ9NYF3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.73■□□□□ 0.75
FAM53CQ9NYF3 AC083906.6-201ENST00000641366 219 ntBASIC19.73■□□□□ 0.75
FAM53CQ9NYF3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FAM53CQ9NYF3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
FAM53CQ9NYF3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FAM53CQ9NYF3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FAM53CQ9NYF3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
FAM53CQ9NYF3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.73■□□□□ 0.75
FAM53CQ9NYF3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
FAM53CQ9NYF3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
FAM53CQ9NYF3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.73■□□□□ 0.75
FAM53CQ9NYF3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 AL356309.3-201ENST00000624132 1934 ntBASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FAM53CQ9NYF3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FAM53CQ9NYF3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FAM53CQ9NYF3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.7■□□□□ 0.74
FAM53CQ9NYF3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FAM53CQ9NYF3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
FAM53CQ9NYF3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
FAM53CQ9NYF3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
FAM53CQ9NYF3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.7■□□□□ 0.74
FAM53CQ9NYF3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.7■□□□□ 0.74
FAM53CQ9NYF3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.7■□□□□ 0.74
FAM53CQ9NYF3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.7■□□□□ 0.74
FAM53CQ9NYF3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FAM53CQ9NYF3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FAM53CQ9NYF3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FAM53CQ9NYF3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FAM53CQ9NYF3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FAM53CQ9NYF3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FAM53CQ9NYF3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FAM53CQ9NYF3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
FAM53CQ9NYF3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FAM53CQ9NYF3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
FAM53CQ9NYF3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FAM53CQ9NYF3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
FAM53CQ9NYF3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
FAM53CQ9NYF3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FAM53CQ9NYF3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
FAM53CQ9NYF3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FAM53CQ9NYF3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
FAM53CQ9NYF3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
FAM53CQ9NYF3 ZNF815P-204ENST00000434898 1737 ntBASIC19.69■□□□□ 0.74
FAM53CQ9NYF3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
FAM53CQ9NYF3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.69■□□□□ 0.74
FAM53CQ9NYF3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
FAM53CQ9NYF3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FAM53CQ9NYF3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FAM53CQ9NYF3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FAM53CQ9NYF3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
FAM53CQ9NYF3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FAM53CQ9NYF3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.69■□□□□ 0.74
FAM53CQ9NYF3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FAM53CQ9NYF3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms