Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC053503.5-201ENST00000601508 636 ntBASIC22.69■■□□□ 1.22
RTN4Q9NQC3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RTN4Q9NQC3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RTN4Q9NQC3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RTN4Q9NQC3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
RTN4Q9NQC3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RTN4Q9NQC3 AC141586.5-201ENST00000624546 2050 ntBASIC22.69■■□□□ 1.22
RTN4Q9NQC3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RTN4Q9NQC3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RTN4Q9NQC3 AC011484.1-201ENST00000377652 1995 ntBASIC22.69■■□□□ 1.22
RTN4Q9NQC3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 AL513477.1-201ENST00000602865 2407 ntBASIC22.68■■□□□ 1.22
RTN4Q9NQC3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 AC080080.1-201ENST00000625121 2420 ntBASIC22.68■■□□□ 1.22
RTN4Q9NQC3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC22.68■■□□□ 1.22
RTN4Q9NQC3 AC061975.6-201ENST00000579045 1553 ntBASIC22.67■■□□□ 1.22
RTN4Q9NQC3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.67■■□□□ 1.22
RTN4Q9NQC3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC22.67■■□□□ 1.22
RTN4Q9NQC3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTN4Q9NQC3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.67■■□□□ 1.22
RTN4Q9NQC3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
RTN4Q9NQC3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTN4Q9NQC3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.67■■□□□ 1.22
RTN4Q9NQC3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.67■■□□□ 1.22
RTN4Q9NQC3 AP001330.3-201ENST00000520123 633 ntBASIC22.67■■□□□ 1.22
RTN4Q9NQC3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.67■■□□□ 1.22
RTN4Q9NQC3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.67■■□□□ 1.22
RTN4Q9NQC3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.67■■□□□ 1.22
RTN4Q9NQC3 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.67■■□□□ 1.22
RTN4Q9NQC3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
RTN4Q9NQC3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTN4Q9NQC3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTN4Q9NQC3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTN4Q9NQC3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC22.67■■□□□ 1.22
RTN4Q9NQC3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTN4Q9NQC3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.67■■□□□ 1.22
RTN4Q9NQC3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTN4Q9NQC3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC22.67■■□□□ 1.22
RTN4Q9NQC3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTN4Q9NQC3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RTN4Q9NQC3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTN4Q9NQC3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.66■■□□□ 1.22
RTN4Q9NQC3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTN4Q9NQC3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC22.66■■□□□ 1.22
RTN4Q9NQC3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTN4Q9NQC3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC22.66■■□□□ 1.22
RTN4Q9NQC3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC22.66■■□□□ 1.22
RTN4Q9NQC3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTN4Q9NQC3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
RTN4Q9NQC3 PBX2P1-201ENST00000493219 1291 ntBASIC22.66■■□□□ 1.22
RTN4Q9NQC3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RTN4Q9NQC3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RTN4Q9NQC3 LINC01465-201ENST00000408887 1940 ntBASIC22.66■■□□□ 1.22
RTN4Q9NQC3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC22.66■■□□□ 1.22
RTN4Q9NQC3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RTN4Q9NQC3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
RTN4Q9NQC3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RTN4Q9NQC3 AL354751.1-201ENST00000412768 1863 ntBASIC22.66■■□□□ 1.22
RTN4Q9NQC3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTN4Q9NQC3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.66■■□□□ 1.22
RTN4Q9NQC3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTN4Q9NQC3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RTN4Q9NQC3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTN4Q9NQC3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTN4Q9NQC3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RTN4Q9NQC3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTN4Q9NQC3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.65■■□□□ 1.22
RTN4Q9NQC3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
RTN4Q9NQC3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTN4Q9NQC3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC22.65■■□□□ 1.22
RTN4Q9NQC3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
RTN4Q9NQC3 AC096631.2-201ENST00000436136 790 ntBASIC22.65■■□□□ 1.22
RTN4Q9NQC3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.65■■□□□ 1.22
RTN4Q9NQC3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RTN4Q9NQC3 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC22.65■■□□□ 1.22
RTN4Q9NQC3 AC106739.1-201ENST00000617035 715 ntBASIC22.65■■□□□ 1.22
RTN4Q9NQC3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTN4Q9NQC3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RTN4Q9NQC3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RTN4Q9NQC3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 150.9 ms