Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 AF201337.1-201ENST00000520239 748 ntBASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 AC105036.2-201ENST00000569468 176 ntBASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 AC022517.1-201ENST00000592429 346 ntBASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 NOC2LP1-202ENST00000452600 2235 ntBASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC52A3Q9NQ40 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC52A3Q9NQ40 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC52A3Q9NQ40 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC52A3Q9NQ40 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC52A3Q9NQ40 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC52A3Q9NQ40 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SLC52A3Q9NQ40 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC52A3Q9NQ40 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SLC52A3Q9NQ40 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC52A3Q9NQ40 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.27■□□□□ 0.52
SLC52A3Q9NQ40 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.27■□□□□ 0.52
SLC52A3Q9NQ40 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SLC52A3Q9NQ40 AC092437.1-201ENST00000624794 1048 ntBASIC18.27■□□□□ 0.52
SLC52A3Q9NQ40 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
SLC52A3Q9NQ40 AP006587.1-201ENST00000534129 1502 ntBASIC18.27■□□□□ 0.51
SLC52A3Q9NQ40 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC52A3Q9NQ40 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SLC52A3Q9NQ40 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC52A3Q9NQ40 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.27■□□□□ 0.51
SLC52A3Q9NQ40 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC52A3Q9NQ40 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.51
SLC52A3Q9NQ40 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
SLC52A3Q9NQ40 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 AC005332.8-201ENST00000622750 2735 ntBASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 CDCA4P2-201ENST00000441182 718 ntBASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 KRT18P16-201ENST00000510337 1294 ntBASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 AC073111.5-205ENST00000641717 521 ntBASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC52A3Q9NQ40 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC52A3Q9NQ40 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC52A3Q9NQ40 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC52A3Q9NQ40 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC52A3Q9NQ40 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC52A3Q9NQ40 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC52A3Q9NQ40 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC52A3Q9NQ40 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms