Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
NEUROD4Q9HD90 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.21■□□□□ 0.5
NEUROD4Q9HD90 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 UNC93B5-201ENST00000530315 699 ntBASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 PRKY-204ENST00000533551 1019 ntBASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
NEUROD4Q9HD90 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.19■□□□□ 0.5
NEUROD4Q9HD90 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms