Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD248Q9HCU0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD248Q9HCU0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD248Q9HCU0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD248Q9HCU0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.25■□□□□ 0.83
CD248Q9HCU0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CD248Q9HCU0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD248Q9HCU0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD248Q9HCU0 AC121338.2-201ENST00000622535 1744 ntBASIC20.24■□□□□ 0.83
CD248Q9HCU0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD248Q9HCU0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CD248Q9HCU0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CD248Q9HCU0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD248Q9HCU0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CD248Q9HCU0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD248Q9HCU0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD248Q9HCU0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CD248Q9HCU0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CD248Q9HCU0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.24■□□□□ 0.83
CD248Q9HCU0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.24■□□□□ 0.83
CD248Q9HCU0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD248Q9HCU0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD248Q9HCU0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.24■□□□□ 0.83
CD248Q9HCU0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.24■□□□□ 0.83
CD248Q9HCU0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.24■□□□□ 0.83
CD248Q9HCU0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD248Q9HCU0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CD248Q9HCU0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CD248Q9HCU0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD248Q9HCU0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD248Q9HCU0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD248Q9HCU0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CD248Q9HCU0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CD248Q9HCU0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.24■□□□□ 0.83
CD248Q9HCU0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD248Q9HCU0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD248Q9HCU0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD248Q9HCU0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CD248Q9HCU0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD248Q9HCU0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.23■□□□□ 0.83
CD248Q9HCU0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD248Q9HCU0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD248Q9HCU0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.23■□□□□ 0.83
CD248Q9HCU0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CD248Q9HCU0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CD248Q9HCU0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.23■□□□□ 0.83
CD248Q9HCU0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD248Q9HCU0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CD248Q9HCU0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CD248Q9HCU0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.23■□□□□ 0.83
CD248Q9HCU0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.23■□□□□ 0.83
CD248Q9HCU0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CD248Q9HCU0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.23■□□□□ 0.83
CD248Q9HCU0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.23■□□□□ 0.83
CD248Q9HCU0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.23■□□□□ 0.83
CD248Q9HCU0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CD248Q9HCU0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CD248Q9HCU0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD248Q9HCU0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CD248Q9HCU0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD248Q9HCU0 NBPF21P-201ENST00000425093 1451 ntBASIC20.23■□□□□ 0.83
CD248Q9HCU0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CD248Q9HCU0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD248Q9HCU0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD248Q9HCU0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD248Q9HCU0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.22■□□□□ 0.83
CD248Q9HCU0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD248Q9HCU0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD248Q9HCU0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CD248Q9HCU0 AC020907.5-201ENST00000624372 1936 ntBASIC20.22■□□□□ 0.83
CD248Q9HCU0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD248Q9HCU0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CD248Q9HCU0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD248Q9HCU0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CD248Q9HCU0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD248Q9HCU0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.22■□□□□ 0.83
CD248Q9HCU0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CD248Q9HCU0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.22■□□□□ 0.83
CD248Q9HCU0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.22■□□□□ 0.83
CD248Q9HCU0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD248Q9HCU0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.22■□□□□ 0.83
CD248Q9HCU0 AL353708.3-201ENST00000610272 989 ntBASIC20.22■□□□□ 0.83
CD248Q9HCU0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD248Q9HCU0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD248Q9HCU0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD248Q9HCU0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD248Q9HCU0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD248Q9HCU0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD248Q9HCU0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD248Q9HCU0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CD248Q9HCU0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CD248Q9HCU0 HTR7P1-201ENST00000538670 1336 ntBASIC20.22■□□□□ 0.83
CD248Q9HCU0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CD248Q9HCU0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.22■□□□□ 0.83
CD248Q9HCU0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD248Q9HCU0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CD248Q9HCU0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD248Q9HCU0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD248Q9HCU0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD248Q9HCU0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms