Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
VPS16Q9H269 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
VPS16Q9H269 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.19■□□□□ 0.98
VPS16Q9H269 AC092368.3-202ENST00000574180 1591 ntBASIC21.19■□□□□ 0.98
VPS16Q9H269 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
VPS16Q9H269 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS16Q9H269 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS16Q9H269 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS16Q9H269 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS16Q9H269 SLC29A4P1-201ENST00000398760 971 ntBASIC21.19■□□□□ 0.98
VPS16Q9H269 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
VPS16Q9H269 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS16Q9H269 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS16Q9H269 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS16Q9H269 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.19■□□□□ 0.98
VPS16Q9H269 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.19■□□□□ 0.98
VPS16Q9H269 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS16Q9H269 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.19■□□□□ 0.98
VPS16Q9H269 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VPS16Q9H269 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS16Q9H269 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS16Q9H269 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
VPS16Q9H269 AP006587.1-201ENST00000534129 1502 ntBASIC21.19■□□□□ 0.98
VPS16Q9H269 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS16Q9H269 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS16Q9H269 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS16Q9H269 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS16Q9H269 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS16Q9H269 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS16Q9H269 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
VPS16Q9H269 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS16Q9H269 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
VPS16Q9H269 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.18■□□□□ 0.98
VPS16Q9H269 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.18■□□□□ 0.98
VPS16Q9H269 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS16Q9H269 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.18■□□□□ 0.98
VPS16Q9H269 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS16Q9H269 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS16Q9H269 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.18■□□□□ 0.98
VPS16Q9H269 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.18■□□□□ 0.98
VPS16Q9H269 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.18■□□□□ 0.98
VPS16Q9H269 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.18■□□□□ 0.98
VPS16Q9H269 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS16Q9H269 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.18■□□□□ 0.98
VPS16Q9H269 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS16Q9H269 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS16Q9H269 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS16Q9H269 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.18■□□□□ 0.98
VPS16Q9H269 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.18■□□□□ 0.98
VPS16Q9H269 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
VPS16Q9H269 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS16Q9H269 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.18■□□□□ 0.98
VPS16Q9H269 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS16Q9H269 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.17■□□□□ 0.98
VPS16Q9H269 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VPS16Q9H269 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.17■□□□□ 0.98
VPS16Q9H269 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS16Q9H269 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
VPS16Q9H269 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS16Q9H269 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS16Q9H269 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS16Q9H269 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS16Q9H269 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VPS16Q9H269 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS16Q9H269 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
VPS16Q9H269 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.17■□□□□ 0.98
VPS16Q9H269 TSPY6P-201ENST00000448518 926 ntBASIC21.17■□□□□ 0.98
VPS16Q9H269 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.17■□□□□ 0.98
VPS16Q9H269 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.17■□□□□ 0.98
VPS16Q9H269 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.17■□□□□ 0.98
VPS16Q9H269 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS16Q9H269 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
VPS16Q9H269 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS16Q9H269 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.17■□□□□ 0.98
VPS16Q9H269 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS16Q9H269 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS16Q9H269 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.17■□□□□ 0.98
VPS16Q9H269 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS16Q9H269 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS16Q9H269 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
VPS16Q9H269 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS16Q9H269 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS16Q9H269 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VPS16Q9H269 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
VPS16Q9H269 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
VPS16Q9H269 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VPS16Q9H269 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VPS16Q9H269 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.16■□□□□ 0.98
VPS16Q9H269 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.16■□□□□ 0.98
VPS16Q9H269 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS16Q9H269 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VPS16Q9H269 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VPS16Q9H269 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.16■□□□□ 0.98
VPS16Q9H269 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
VPS16Q9H269 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS16Q9H269 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS16Q9H269 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS16Q9H269 NCF1B-203ENST00000435988 1254 ntBASIC21.16■□□□□ 0.98
VPS16Q9H269 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.16■□□□□ 0.98
VPS16Q9H269 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms