Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CNTNAP3Q9BZ76 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.4■□□□□ 0.54
CNTNAP3Q9BZ76 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.4■□□□□ 0.54
CNTNAP3Q9BZ76 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CNTNAP3Q9BZ76 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.4■□□□□ 0.54
CNTNAP3Q9BZ76 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.4■□□□□ 0.54
CNTNAP3Q9BZ76 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.4■□□□□ 0.54
CNTNAP3Q9BZ76 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CNTNAP3Q9BZ76 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.4■□□□□ 0.54
CNTNAP3Q9BZ76 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
CNTNAP3Q9BZ76 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CNTNAP3Q9BZ76 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.39■□□□□ 0.54
CNTNAP3Q9BZ76 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 AP003041.3-201ENST00000527151 707 ntBASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 AC064862.7-201ENST00000604520 867 ntBASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.39■□□□□ 0.53
CNTNAP3Q9BZ76 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 RNPS1P1-201ENST00000507437 918 ntBASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 AL353801.3-201ENST00000609898 542 ntBASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CNTNAP3Q9BZ76 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP3Q9BZ76 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.37■□□□□ 0.53
CNTNAP3Q9BZ76 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP3Q9BZ76 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.37■□□□□ 0.53
CNTNAP3Q9BZ76 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP3Q9BZ76 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP3Q9BZ76 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP3Q9BZ76 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CNTNAP3Q9BZ76 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP3Q9BZ76 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP3Q9BZ76 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.37■□□□□ 0.53
CNTNAP3Q9BZ76 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.37■□□□□ 0.53
CNTNAP3Q9BZ76 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CNTNAP3Q9BZ76 LINC00265-3P-201ENST00000447588 903 ntBASIC18.37■□□□□ 0.53
CNTNAP3Q9BZ76 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.37■□□□□ 0.53
CNTNAP3Q9BZ76 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.37■□□□□ 0.53
CNTNAP3Q9BZ76 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.37■□□□□ 0.53
CNTNAP3Q9BZ76 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CNTNAP3Q9BZ76 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.37■□□□□ 0.53
CNTNAP3Q9BZ76 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CNTNAP3Q9BZ76 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.37■□□□□ 0.53
CNTNAP3Q9BZ76 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.37■□□□□ 0.53
CNTNAP3Q9BZ76 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms