Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 AL355472.2-201ENST00000422958 438 ntBASIC11.48□□□□□ -0.57
LIMD2Q9BT23 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 PHB2-213ENST00000546111 858 ntTSL 2 BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 H19-201ENST00000411754 1788 ntTSL 5 BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LIMD2Q9BT23 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 FZD10-202ENST00000539839 3282 ntBASIC11.47□□□□□ -0.57
LIMD2Q9BT23 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 BX276092.2-201ENST00000417668 665 ntBASIC11.47□□□□□ -0.57
LIMD2Q9BT23 AC093787.1-201ENST00000450396 207 ntBASIC11.47□□□□□ -0.57
LIMD2Q9BT23 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 RAP2CP1-201ENST00000605103 478 ntBASIC11.47□□□□□ -0.57
LIMD2Q9BT23 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
LIMD2Q9BT23 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms