Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 AC073111.5-205ENST00000641717 521 ntBASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 AC009113.1-201ENST00000570267 2443 ntBASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 AL390719.1-204ENST00000412397 1219 ntBASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 AF201337.1-201ENST00000520239 748 ntBASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 AC080038.1-201ENST00000611274 1154 ntBASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 MIR5787-201ENST00000611784 55 ntBASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 AC006557.6-201ENST00000623071 864 ntBASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 AC092437.1-201ENST00000624794 1048 ntBASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HDHD3Q9BSH5 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 AC005829.2-201ENST00000571422 1056 ntBASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 IKBKGP1-201ENST00000612193 1073 ntBASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HDHD3Q9BSH5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.27■□□□□ 0.19
HDHD3Q9BSH5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HDHD3Q9BSH5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.27■□□□□ 0.19
HDHD3Q9BSH5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms