Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 AC091799.1-201ENST00000422823 811 ntBASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 MKRN4P-201ENST00000444706 1521 ntBASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 PRORSD1P-202ENST00000563365 2154 ntBASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 AC138907.5-202ENST00000569484 235 ntBASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.29■□□□□ 0.2
SEC22CQ9BRL7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 BCL2-203ENST00000589955 5011 ntBASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 MIR4767-201ENST00000582827 78 ntBASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.28■□□□□ 0.2
SEC22CQ9BRL7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms