Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 NTF6G-201ENST00000591094 616 ntBASIC18.81■□□□□ 0.6
EBF4Q9BQW3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 TFP1-202ENST00000475455 1573 ntBASIC18.81■□□□□ 0.6
EBF4Q9BQW3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EBF4Q9BQW3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 NOC2LP2-201ENST00000407594 1944 ntBASIC18.8■□□□□ 0.6
EBF4Q9BQW3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 FZD10-202ENST00000539839 3282 ntBASIC18.8■□□□□ 0.6
EBF4Q9BQW3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
EBF4Q9BQW3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 IRX1P1-201ENST00000438849 1838 ntBASIC18.79■□□□□ 0.6
EBF4Q9BQW3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 MIR638-201ENST00000385237 100 ntBASIC18.79■□□□□ 0.6
EBF4Q9BQW3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EBF4Q9BQW3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
EBF4Q9BQW3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
EBF4Q9BQW3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.78■□□□□ 0.6
EBF4Q9BQW3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
EBF4Q9BQW3 AC104417.2-201ENST00000562989 1793 ntBASIC18.78■□□□□ 0.6
EBF4Q9BQW3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.78■□□□□ 0.6
EBF4Q9BQW3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EBF4Q9BQW3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
EBF4Q9BQW3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.78■□□□□ 0.6
EBF4Q9BQW3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EBF4Q9BQW3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
EBF4Q9BQW3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EBF4Q9BQW3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EBF4Q9BQW3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.78■□□□□ 0.6
EBF4Q9BQW3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
EBF4Q9BQW3 CYP2T1P-201ENST00000432607 1285 ntBASIC18.78■□□□□ 0.6
EBF4Q9BQW3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms