Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.62□□□□□ -0.07
VGLL1Q99990 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.62□□□□□ -0.07
VGLL1Q99990 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VGLL1Q99990 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.62□□□□□ -0.07
VGLL1Q99990 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VGLL1Q99990 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
VGLL1Q99990 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VGLL1Q99990 CROCCP3-202ENST00000420820 1947 ntBASIC14.62□□□□□ -0.07
VGLL1Q99990 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VGLL1Q99990 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.62□□□□□ -0.07
VGLL1Q99990 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VGLL1Q99990 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
VGLL1Q99990 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.62□□□□□ -0.07
VGLL1Q99990 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VGLL1Q99990 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
VGLL1Q99990 AL138781.2-201ENST00000617896 1843 ntBASIC14.62□□□□□ -0.07
VGLL1Q99990 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VGLL1Q99990 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VGLL1Q99990 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VGLL1Q99990 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VGLL1Q99990 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
VGLL1Q99990 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.61□□□□□ -0.07
VGLL1Q99990 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
VGLL1Q99990 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VGLL1Q99990 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VGLL1Q99990 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VGLL1Q99990 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
VGLL1Q99990 GPX1P1-201ENST00000388829 606 ntBASIC14.61□□□□□ -0.07
VGLL1Q99990 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.61□□□□□ -0.07
VGLL1Q99990 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC14.61□□□□□ -0.07
VGLL1Q99990 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
VGLL1Q99990 AC005181.1-201ENST00000604782 1256 ntBASIC14.61□□□□□ -0.07
VGLL1Q99990 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
VGLL1Q99990 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
VGLL1Q99990 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
VGLL1Q99990 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VGLL1Q99990 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VGLL1Q99990 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VGLL1Q99990 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.61□□□□□ -0.07
VGLL1Q99990 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
VGLL1Q99990 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
VGLL1Q99990 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
VGLL1Q99990 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VGLL1Q99990 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.61□□□□□ -0.07
VGLL1Q99990 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.61□□□□□ -0.07
VGLL1Q99990 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VGLL1Q99990 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
VGLL1Q99990 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VGLL1Q99990 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.6□□□□□ -0.07
VGLL1Q99990 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VGLL1Q99990 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.6□□□□□ -0.07
VGLL1Q99990 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VGLL1Q99990 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
VGLL1Q99990 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VGLL1Q99990 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VGLL1Q99990 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
VGLL1Q99990 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.6□□□□□ -0.07
VGLL1Q99990 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VGLL1Q99990 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.6□□□□□ -0.07
VGLL1Q99990 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VGLL1Q99990 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.6□□□□□ -0.07
VGLL1Q99990 AL162430.1-201ENST00000480705 870 ntBASIC14.6□□□□□ -0.07
VGLL1Q99990 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VGLL1Q99990 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VGLL1Q99990 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.6□□□□□ -0.07
VGLL1Q99990 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC14.6□□□□□ -0.07
VGLL1Q99990 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VGLL1Q99990 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.6□□□□□ -0.07
VGLL1Q99990 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VGLL1Q99990 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.6□□□□□ -0.07
VGLL1Q99990 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.6□□□□□ -0.07
VGLL1Q99990 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VGLL1Q99990 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VGLL1Q99990 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.6□□□□□ -0.07
VGLL1Q99990 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VGLL1Q99990 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
VGLL1Q99990 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VGLL1Q99990 TFP1-202ENST00000475455 1573 ntBASIC14.6□□□□□ -0.07
VGLL1Q99990 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
VGLL1Q99990 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VGLL1Q99990 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
VGLL1Q99990 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.59□□□□□ -0.07
VGLL1Q99990 AC141586.3-201ENST00000562166 1838 ntBASIC14.59□□□□□ -0.07
VGLL1Q99990 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
VGLL1Q99990 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VGLL1Q99990 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VGLL1Q99990 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VGLL1Q99990 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VGLL1Q99990 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VGLL1Q99990 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VGLL1Q99990 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
VGLL1Q99990 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.59□□□□□ -0.07
VGLL1Q99990 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.59□□□□□ -0.07
VGLL1Q99990 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
VGLL1Q99990 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.59□□□□□ -0.07
VGLL1Q99990 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VGLL1Q99990 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
VGLL1Q99990 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VGLL1Q99990 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VGLL1Q99990 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms