Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CPNE1Q99829 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE1Q99829 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE1Q99829 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE1Q99829 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE1Q99829 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE1Q99829 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE1Q99829 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.29■□□□□ 0.68
CPNE1Q99829 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE1Q99829 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE1Q99829 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
CPNE1Q99829 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.29■□□□□ 0.68
CPNE1Q99829 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.29■□□□□ 0.68
CPNE1Q99829 KRT18P16-201ENST00000510337 1294 ntBASIC19.29■□□□□ 0.68
CPNE1Q99829 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE1Q99829 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.29■□□□□ 0.68
CPNE1Q99829 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.29■□□□□ 0.68
CPNE1Q99829 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.29■□□□□ 0.68
CPNE1Q99829 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.29■□□□□ 0.68
CPNE1Q99829 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE1Q99829 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE1Q99829 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE1Q99829 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE1Q99829 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CPNE1Q99829 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE1Q99829 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE1Q99829 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE1Q99829 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE1Q99829 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.28■□□□□ 0.68
CPNE1Q99829 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE1Q99829 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE1Q99829 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE1Q99829 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE1Q99829 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE1Q99829 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE1Q99829 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.28■□□□□ 0.68
CPNE1Q99829 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
CPNE1Q99829 AC120498.8-201ENST00000614275 531 ntBASIC19.28■□□□□ 0.68
CPNE1Q99829 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.28■□□□□ 0.68
CPNE1Q99829 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
CPNE1Q99829 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE1Q99829 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE1Q99829 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CPNE1Q99829 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
CPNE1Q99829 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CPNE1Q99829 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE1Q99829 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE1Q99829 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE1Q99829 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CPNE1Q99829 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE1Q99829 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE1Q99829 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.27■□□□□ 0.68
CPNE1Q99829 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.27■□□□□ 0.68
CPNE1Q99829 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE1Q99829 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.27■□□□□ 0.68
CPNE1Q99829 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE1Q99829 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CPNE1Q99829 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CPNE1Q99829 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE1Q99829 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE1Q99829 FP475955.4-201ENST00000623131 1990 ntBASIC19.27■□□□□ 0.68
CPNE1Q99829 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.27■□□□□ 0.68
CPNE1Q99829 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.27■□□□□ 0.68
CPNE1Q99829 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
CPNE1Q99829 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.27■□□□□ 0.68
CPNE1Q99829 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.27■□□□□ 0.68
CPNE1Q99829 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.27■□□□□ 0.68
CPNE1Q99829 AL121829.2-201ENST00000620908 328 ntBASIC19.27■□□□□ 0.68
CPNE1Q99829 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE1Q99829 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.27■□□□□ 0.67
CPNE1Q99829 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CPNE1Q99829 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE1Q99829 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE1Q99829 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE1Q99829 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE1Q99829 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE1Q99829 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CPNE1Q99829 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE1Q99829 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE1Q99829 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE1Q99829 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE1Q99829 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CPNE1Q99829 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE1Q99829 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.26■□□□□ 0.67
CPNE1Q99829 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.26■□□□□ 0.67
CPNE1Q99829 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CPNE1Q99829 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CPNE1Q99829 TUBB8P6-201ENST00000436895 1288 ntBASIC19.26■□□□□ 0.67
CPNE1Q99829 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.26■□□□□ 0.67
CPNE1Q99829 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.26■□□□□ 0.67
CPNE1Q99829 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.26■□□□□ 0.67
CPNE1Q99829 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.26■□□□□ 0.67
CPNE1Q99829 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE1Q99829 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.26■□□□□ 0.67
CPNE1Q99829 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.26■□□□□ 0.67
CPNE1Q99829 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.26■□□□□ 0.67
CPNE1Q99829 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE1Q99829 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE1Q99829 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
CPNE1Q99829 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms