Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 BX323043.1-201ENST00000641006 1765 ntBASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 AP000974.1-201ENST00000623909 2387 ntBASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CSPG4P5Q96PW8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 AC098818.2-201ENST00000564925 2320 ntBASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 AL160286.2-201ENST00000567150 934 ntBASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSPG4P5Q96PW8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CSPG4P5Q96PW8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSPG4P5Q96PW8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CSPG4P5Q96PW8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CSPG4P5Q96PW8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CSPG4P5Q96PW8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.89■□□□□ 0.77
CSPG4P5Q96PW8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.89■□□□□ 0.77
CSPG4P5Q96PW8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 AL161938.1-201ENST00000569833 2180 ntBASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 HTR7P1-201ENST00000538670 1336 ntBASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 ABHD17AP1-201ENST00000358206 933 ntBASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 AC098590.1-201ENST00000468126 897 ntBASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG4P5Q96PW8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSPG4P5Q96PW8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CSPG4P5Q96PW8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSPG4P5Q96PW8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.87■□□□□ 0.77
CSPG4P5Q96PW8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
CSPG4P5Q96PW8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CSPG4P5Q96PW8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CSPG4P5Q96PW8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms