Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
ECHDC3Q96DC8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.33■□□□□ 0.69
ECHDC3Q96DC8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.33■□□□□ 0.69
ECHDC3Q96DC8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ECHDC3Q96DC8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.33■□□□□ 0.69
ECHDC3Q96DC8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ECHDC3Q96DC8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ECHDC3Q96DC8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ECHDC3Q96DC8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ECHDC3Q96DC8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ECHDC3Q96DC8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ECHDC3Q96DC8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.33■□□□□ 0.68
ECHDC3Q96DC8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ECHDC3Q96DC8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.33■□□□□ 0.68
ECHDC3Q96DC8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.33■□□□□ 0.68
ECHDC3Q96DC8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.33■□□□□ 0.68
ECHDC3Q96DC8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ECHDC3Q96DC8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.33■□□□□ 0.68
ECHDC3Q96DC8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
ECHDC3Q96DC8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ECHDC3Q96DC8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.33■□□□□ 0.68
ECHDC3Q96DC8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ECHDC3Q96DC8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ECHDC3Q96DC8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 MMP23A-201ENST00000234610 1017 ntBASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ECHDC3Q96DC8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 MIR1238-201ENST00000408483 83 ntBASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 AC087499.1-201ENST00000418141 1075 ntBASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 AC097488.1-201ENST00000507834 756 ntBASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.31■□□□□ 0.68
ECHDC3Q96DC8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 AL390955.1-201ENST00000428694 934 ntBASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 KRT8P9-201ENST00000558927 1449 ntBASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms