Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.79■■□□□ 1.08
VTI1AQ96AJ9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.79■■□□□ 1.08
VTI1AQ96AJ9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.79■■□□□ 1.08
VTI1AQ96AJ9 HLA-A-209ENST00000638375 975 ntBASIC21.79■■□□□ 1.08
VTI1AQ96AJ9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VTI1AQ96AJ9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VTI1AQ96AJ9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
VTI1AQ96AJ9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 COX11P1-201ENST00000489116 835 ntBASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 YBX1P2-201ENST00000489612 999 ntBASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.78■■□□□ 1.08
VTI1AQ96AJ9 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
VTI1AQ96AJ9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
VTI1AQ96AJ9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
VTI1AQ96AJ9 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VTI1AQ96AJ9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
VTI1AQ96AJ9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
VTI1AQ96AJ9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.77■■□□□ 1.08
VTI1AQ96AJ9 AL138966.2-201ENST00000621997 464 ntBASIC21.77■■□□□ 1.08
VTI1AQ96AJ9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.77■■□□□ 1.08
VTI1AQ96AJ9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
VTI1AQ96AJ9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.77■■□□□ 1.08
VTI1AQ96AJ9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
VTI1AQ96AJ9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VTI1AQ96AJ9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VTI1AQ96AJ9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.77■■□□□ 1.07
VTI1AQ96AJ9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.77■■□□□ 1.07
VTI1AQ96AJ9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 AL031133.1-201ENST00000406807 723 ntBASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 FAM8A6P-201ENST00000407496 1135 ntBASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 SLC25A1P2-201ENST00000430693 912 ntBASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTI1AQ96AJ9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 AC007663.1-201ENST00000438948 1240 ntBASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 KRT18P56-201ENST00000507275 550 ntBASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms